Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0718.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 151 6e-36
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 146 2e-34
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 117 2e-25
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 81 1e-14
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 78 1e-13
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 71 1e-11
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 67 2e-10
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 58 8e-08
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 54 2e-06
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 54 2e-06
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 53 4e-06
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 50 3e-05
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 50 3e-05
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 2e-04
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 47 3e-04
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 44 0.002
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.003
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 43 0.004
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 41 0.018
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 38 0.095
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 38 0.17
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 37 0.22
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 36 0.38
UniRef50_Q2JG72 Cluster: Rieske (2Fe-2S) protein; n=2; Frankia|R... 35 0.88
UniRef50_Q5C0Z1 Cluster: SJCHGC03734 protein; n=1; Schistosoma j... 35 1.2
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 34 1.5
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 34 1.5
UniRef50_A6D6W3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 34 2.0
UniRef50_Q6FVQ1 Cluster: Similar to sp|P23201 Saccharomyces cere... 34 2.0
UniRef50_Q2S5L7 Cluster: Beta-N-acetylhexosaminidase; n=1; Salin... 33 2.7
UniRef50_Q1NC65 Cluster: Sel1-like repeat protein; n=1; Sphingom... 33 2.7
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 33 2.7
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 33 3.6
UniRef50_Q5VWG9 Cluster: Transcription initiation factor TFIID s... 33 3.6
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 33 3.6
UniRef50_Q9RCV7 Cluster: Putative uncharacterized protein SCO085... 33 4.7
UniRef50_Q2R164 Cluster: Remorin, C-terminal region family prote... 33 4.7
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 33 4.7
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 33 4.7
UniRef50_Q7S1N5 Cluster: Putative uncharacterized protein NCU092... 32 6.2
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 32 6.2
UniRef50_Q3KPN0 Cluster: LOC733385 protein; n=2; Xenopus laevis|... 32 8.2
UniRef50_Q7NAE7 Cluster: PutA; n=1; Mycoplasma gallisepticum|Rep... 32 8.2
UniRef50_Q6MIX4 Cluster: Motility protein A; n=1; Bdellovibrio b... 32 8.2
UniRef50_Q0LCN2 Cluster: Primosomal protein N'; n=1; Herpetosiph... 32 8.2
UniRef50_A1BCK6 Cluster: Putative uncharacterized protein; n=2; ... 32 8.2
UniRef50_Q0CGY8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.2
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 151 bits (367), Expect = 6e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 146 bits (355), Expect = 2e-34
Identities = 78/152 (51%), Positives = 96/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRD-LLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 117 bits (281), Expect = 2e-25
Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGS-SSSRCHCPIV 397
+RKA++ HL+ + + E + + + G+ + + P+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 398 SRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISRGT 151
Score = 48.4 bits (110), Expect = 9e-05
Identities = 18/28 (64%), Positives = 25/28 (89%)
Frame = +1
Query: 250 QHPALEKLLPHIKGNVGFVFTRGDLVEV 333
Q+P LEK+LPH+KGN+GFVFT D+V++
Sbjct: 71 QNPNLEKVLPHVKGNIGFVFTHEDMVDI 98
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
R+ +L N+V APA+ GAIAP+ V +PA+ K ++ S K RG IE
Sbjct: 99 REIMLSNQVGAPAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIE 153
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 81.4 bits (192), Expect = 1e-14
Identities = 54/153 (35%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+ LMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSR--NCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSS-RCHCP 391
M+++++ H +N + N + + + V + G+ + P
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 392 IVSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
I NTGL P +T Q L I K KGT
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGT 153
Score = 35.9 bits (79), Expect = 0.51
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 259 ALEKLLPHIKGNVGFVFTRGDLVEV 333
A+ LLP ++GNVG +FT+GDL EV
Sbjct: 76 AILNLLPLLQGNVGLIFTKGDLKEV 100
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 77.8 bits (183), Expect = 1e-13
Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Frame = +2
Query: 56 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAI 235
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+ LMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 236 KDHLDNI--QPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSS-RCHCPIVSRH 406
+ H D Q + + + + V + G+ + PI
Sbjct: 67 RIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVV 126
Query: 407 SRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGL P +T Q L I K KGT
Sbjct: 127 QPGNTGLDPSQTSFFQVLNIPTKINKGT 154
Score = 35.1 bits (77), Expect = 0.88
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 259 ALEKLLPHIKGNVGFVFTRGDLVEV 333
A LLP ++GNVG +FT+GDL EV
Sbjct: 77 AFLSLLPLLQGNVGLIFTKGDLKEV 101
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 71.3 bits (167), Expect = 1e-11
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 221 MRKAIKDHLDNIQPSRN--CCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCHCPI 394
+RKAIK+ + QP H + + + ++P + + P
Sbjct: 68 IRKAIKNQAET-QPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPN 126
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKG 487
+TGL P +T +QAL I K KG
Sbjct: 127 DVIVPAGDTGLDPTQTNFVQALNIASKITKG 157
Score = 48.4 bits (110), Expect = 9e-05
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +1
Query: 256 PALEKLLPHIKGNVGFVFTRGDLVEV 333
P LE+LLPHIKGNVGF+FT+GDL ++
Sbjct: 80 PELEELLPHIKGNVGFIFTKGDLYQL 105
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 66.9 bits (156), Expect = 2e-10
Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATL--ASCSPAETXLRS*QTVGEQSPGSSSSRCHCPI 394
+R A+K +L + + + C + +R+ + S + PI
Sbjct: 61 IRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKG 487
TG+ P T L++L I K KG
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKG 151
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 58.4 bits (135), Expect = 8e-08
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Frame = +2
Query: 68 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDHL 247
K + K +L Y K + AD VGS Q+Q+IR S+RG LMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 248 DNIQPSRNCCHT---SRATLASCSPAETXLRS*QTVGEQSPGS-SSSRCHCPIVSRHSRH 415
D+ +P + +T + C ++ + + Q G+ + + P
Sbjct: 69 DS-KPELDALNTYLKQNTCIIFCKDNIAEVK--RVINTQRVGAPAKAGVFAPNDVIIPAG 125
Query: 416 NTGLGPEKTXXLQALFILPKXQKG 487
TG+ P +T LQ L I K +G
Sbjct: 126 PTGMEPTQTSFLQDLKIATKINRG 149
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +2
Query: 68 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDHL 247
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRGSSIALMGKNT 217
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + +++ ++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 218 MMRKAIKDHLDNI 256
+ +K + + +
Sbjct: 61 LFKKVLATRVQEL 73
Score = 38.3 bits (85), Expect = 0.095
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 4/33 (12%)
Frame = +3
Query: 348 ENKVQAPARPGAIAPLSVVIP----ATTPASVQ 434
ENKV+ PAR GA+AP+ VVIP PAS+Q
Sbjct: 122 ENKVETPARVGAVAPIDVVIPPGPTGMDPASIQ 154
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 52.8 bits (121), Expect = 4e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 53 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKA 232
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I ++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 233 IK 238
++
Sbjct: 67 VQ 68
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 50.0 bits (114), Expect = 3e-05
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +2
Query: 56 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAI 235
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 236 K----DHLDNIQP 262
D L N+ P
Sbjct: 69 NQLDDDKLKNLLP 81
Score = 34.3 bits (75), Expect = 1.5
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 262 LEKLLPHIKGNVGFVFTRGDLVEVVTNCWRTKSR 363
L+ LLP+IK NV FVFT GD ++ +TK +
Sbjct: 76 LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRK 109
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 50.0 bits (114), Expect = 3e-05
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIALMGKNT 217
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S+ LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 218 MMRKAIKDHL 247
+++ A++ +
Sbjct: 61 LIKAALQKRI 70
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 47.6 bits (108), Expect = 2e-04
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +2
Query: 44 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIALMGKNT 217
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 218 MMRKAIKDHLD 250
+MR A+++ LD
Sbjct: 72 LMRIALEEKLD 82
Score = 32.3 bits (70), Expect = 6.2
Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 339 KLLE-NKVQAPARPGAIAPLSVVIP 410
KLLE +K APA+PG IAP +V+P
Sbjct: 112 KLLEESKASAPAKPGDIAPEDIVVP 136
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 46.8 bits (106), Expect = 3e-04
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 208 KKHYDAQSHQRPPGQH----PALEKLLPHIKGNVGFVFTRGDLVEVVTNCWRTKSRLQLV 375
K+ Y HQ+ H L KLLPHIK VGFVFT+GDLVEV +K L +
Sbjct: 683 KEIYPGSIHQQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKVALS-I 741
Query: 376 PVPL 387
P+ +
Sbjct: 742 PIKI 745
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 44.0 bits (99), Expect = 0.002
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 14/155 (9%)
Frame = +2
Query: 68 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDHL 247
K Y + L +Y + DNV SQQ+ +R LRG +MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 248 DNIQPSR------NCCHTSRATLASCS--------PAETXLRS*QTVGEQSPGSSSSRCH 385
++ + S N C + + + P T + V Q+P +
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRV--QAPARVGAIAP 125
Query: 386 CPIVSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
C ++ NTG+ P+ T QAL I K KGT
Sbjct: 126 CDVIV--PAGNTGMEPKATSFFQALNIATKIAKGT 158
Score = 37.9 bits (84), Expect = 0.13
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 348 ENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
+++VQAPAR GAIAP V++PA + ++ + K +G +E
Sbjct: 111 KHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVE 160
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/69 (26%), Positives = 37/69 (53%)
Frame = +2
Query: 50 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRK 229
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 230 AIKDHLDNI 256
A+++ D +
Sbjct: 70 ALEEAGDGL 78
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +2
Query: 14 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 193
RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R S++G +
Sbjct: 16 RSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYA 74
Query: 194 IALMGKNTMMRKAI 235
MGKN +MR A+
Sbjct: 75 RIFMGKNQLMRYAL 88
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 40.7 bits (91), Expect = 0.018
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 221 MRKAIKD 241
+R+AI D
Sbjct: 85 IRRAIAD 91
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 38.3 bits (85), Expect = 0.095
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 86 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDH 244
K I LL+ Y IV +N+ S+Q+ IR LRG+S ++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNN 63
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 37.5 bits (83), Expect = 0.17
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 65 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKA 232
WK I LL Y + +GS+Q+Q+IR RG ++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 37.1 bits (82), Expect = 0.22
Identities = 17/59 (28%), Positives = 35/59 (59%)
Frame = +2
Query: 65 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKD 241
WK + +I + ++E+ +V + + Q+QQIR +LRG++ M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNE 69
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 36.3 bits (80), Expect = 0.38
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 68 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI-ALMGKNTMMRKAI 235
K +Y K+ L +Y K +V + NV + Q+ IR L L GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAV 67
>UniRef50_Q2JG72 Cluster: Rieske (2Fe-2S) protein; n=2; Frankia|Rep:
Rieske (2Fe-2S) protein - Frankia sp. (strain CcI3)
Length = 298
Score = 35.1 bits (77), Expect = 0.88
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 145 GLATDAADPYLATWLQYR-AHGKKHYDAQSHQRPPGQHP 258
GLAT + YL L YR A G H + H PPG HP
Sbjct: 156 GLATASTSAYLGGHLAYRQASGANHTEEVPHLLPPGWHP 194
>UniRef50_Q5C0Z1 Cluster: SJCHGC03734 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03734 protein - Schistosoma
japonicum (Blood fluke)
Length = 316
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -3
Query: 341 FVTTSTRSPRVNTKPTLPLMCGNSFSRAGCCPGGL 237
F+T +RSP VN L L +SFSR GC G L
Sbjct: 248 FITMLSRSPPVNVSQKLSLETPDSFSRFGCFSGNL 282
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 34.3 bits (75), Expect = 1.5
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 95 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGS--SIALMGKNTMMRKAIKDHLD 250
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H D
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQHSD 219
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 34.3 bits (75), Expect = 1.5
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +2
Query: 5 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 184
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 185 GSSIALMGKNTMMRKAI 235
G+ GK +M KA+
Sbjct: 63 GTGRFFFGKGKVMAKAL 79
>UniRef50_A6D6W3 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 336
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +2
Query: 92 IQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDHLDNIQPSR 268
+ L++ YP F+VG+D VG+ QQ +S ++ + KN + A ++ LD + +R
Sbjct: 278 LALIEAYPDRFMVGSDVVGAFGYQQTALSTWHPILSALPKNIADKMAYQNMLDVLPKTR 336
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 33.9 bits (74), Expect = 2.0
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +2
Query: 113 PKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDHLDNIQPSRNCCHTSRA 292
P A S + Q + RG S+++MGK +MR+A + PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 293 TLASCSPA 316
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_Q6FVQ1 Cluster: Similar to sp|P23201 Saccharomyces
cerevisiae YLL021w SPA2 involved in cell polarity; n=1;
Candida glabrata|Rep: Similar to sp|P23201 Saccharomyces
cerevisiae YLL021w SPA2 involved in cell polarity -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 1178
Score = 33.9 bits (74), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 336 DKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFS 464
D L+ ++P +P I ++ P TPAS RKP LFS
Sbjct: 594 DSFLDQNEESPVKPLKITQKAINSPKLTPASTSRKPSGTGLFS 636
>UniRef50_Q2S5L7 Cluster: Beta-N-acetylhexosaminidase; n=1;
Salinibacter ruber DSM 13855|Rep:
Beta-N-acetylhexosaminidase - Salinibacter ruber (strain
DSM 13855)
Length = 885
Score = 33.5 bits (73), Expect = 2.7
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -1
Query: 397 DNGAMAPGRAGAWTLFSNSLSR---PQXGLRG*TRSQRCP*CVATVSRGLDVVQVVFDGF 227
D+GA+ RA AWT F+N L P+ +R S R P ATV G V G
Sbjct: 775 DSGALRARRAEAWTAFANRLGHRELPRLSIRHPDWSYRLPPPGATVEAGTLRANVALPGL 834
Query: 226 A 224
A
Sbjct: 835 A 835
>UniRef50_Q1NC65 Cluster: Sel1-like repeat protein; n=1;
Sphingomonas sp. SKA58|Rep: Sel1-like repeat protein -
Sphingomonas sp. SKA58
Length = 335
Score = 33.5 bits (73), Expect = 2.7
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 330 GRDKLLENKVQAPARPGAIAPLSVVIPATTPAS-VQRKP 443
G+ L N APARPG A + IPA+TPA V+ KP
Sbjct: 190 GKGDLSANTPAAPARPGPSAVRATDIPASTPAPIVKAKP 228
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 33.5 bits (73), Expect = 2.7
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 342 LLENKVQAPARPGAIAPLSVVIPA 413
L +N+ APA+PGA+ P VV+PA
Sbjct: 103 LQQNRQPAPAKPGAVVPKDVVVPA 126
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 33.1 bits (72), Expect = 3.6
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 184 WLQYRAHGKKHYDAQSHQRPPGQHPALEKLLPHIKGNVGFVFTRGDLVEV 333
WL R + + ++ H G +P L+P + GNVG + T+GDL EV
Sbjct: 592 WLPKRLFSQ--HSSRLHAEKTG-NPVFLNLVPLLVGNVGLISTKGDLKEV 638
>UniRef50_Q5VWG9 Cluster: Transcription initiation factor TFIID
subunit 3; n=104; Eukaryota|Rep: Transcription
initiation factor TFIID subunit 3 - Homo sapiens (Human)
Length = 929
Score = 33.1 bits (72), Expect = 3.6
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKP 443
+DK E+K++APA P + P + +P +PA+ R P
Sbjct: 639 KDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVP 675
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 33.1 bits (72), Expect = 3.6
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 86 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAI 235
+I +++ P IV NV + QMQ+IR RG + + KNT++ +A+
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL 67
>UniRef50_Q9RCV7 Cluster: Putative uncharacterized protein SCO0854;
n=3; Streptomyces|Rep: Putative uncharacterized protein
SCO0854 - Streptomyces coelicolor
Length = 863
Score = 32.7 bits (71), Expect = 4.7
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 312 GEHEANVALDVWQQFLEGWMLSRWSLMALRIIVFFPMSAILEPRSE 175
G+ A VA D+WQQF G ++ W L R A++ +E
Sbjct: 724 GDDLAMVAADLWQQFTSGGRVTLWDLSVWRAAALSSQVAVVSREAE 769
>UniRef50_Q2R164 Cluster: Remorin, C-terminal region family protein,
expressed; n=4; Oryza sativa|Rep: Remorin, C-terminal
region family protein, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 493
Score = 32.7 bits (71), Expect = 4.7
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Frame = +2
Query: 233 IKDHL-DNIQPSRNC-------CHTSRATLASCSPAETXLRS*QTVG-EQSP--GSSSSR 379
+KD DN++PS+ C ++ T A A + + +G E +P S++SR
Sbjct: 210 LKDKFTDNVEPSKESFVFRSSYCEPTKNTAAQAVAAGNGIDHRRDIGTEMTPLGSSTTSR 269
Query: 380 CHCPIVSRH-SRHNT 421
CH PI S +RHNT
Sbjct: 270 CHTPIKSTSPARHNT 284
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 32.7 bits (71), Expect = 4.7
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +1
Query: 253 HPALEKLLPHIKGNVGFVFTRGDLVEV 333
+P L+P + GNVG +FT+GDL EV
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEV 41
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 32.7 bits (71), Expect = 4.7
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 14 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 193
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 194 IALMGKNTMMR 226
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 32.7 bits (71), Expect = 4.7
Identities = 14/26 (53%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +3
Query: 339 KLLEN-KVQAPARPGAIAPLSVVIPA 413
K+LE+ K +APA+ G+IAP +V+PA
Sbjct: 96 KILEDSKTEAPAKAGSIAPADIVVPA 121
>UniRef50_Q7S1N5 Cluster: Putative uncharacterized protein NCU09272.1;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein NCU09272.1 - Neurospora crassa
Length = 1050
Score = 32.3 bits (70), Expect = 6.2
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +1
Query: 253 HPALEKLLPHIKGNVGFVFTRGDLVEVVTNCWRTKSRLQLVPVPLPHCQSSFPPQHRPR- 429
H L + H N+ F +V N W ++ L P+ PH SS PP R R
Sbjct: 782 HTFLLAHVQHAADNIHFAAASNQTCQV-DNSWERETGLPSPPITEPHDPSSPPPSKRRRL 840
Query: 430 SRENLXLTSSFHPTKXSK 483
+ + +SS H + K
Sbjct: 841 ASSSSSYSSSSHKAQEQK 858
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 329 STRSPRVNTKPTLPLMCGNSFSRAG 255
S V TKPTLPL GN+FS++G
Sbjct: 56 SVNGSLVKTKPTLPLTKGNNFSKSG 80
Score = 31.9 bits (69), Expect = 8.2
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = -2
Query: 237 LMALRIIVFFPMSAILEPRSEXXXXXXXCEPTLSAPTMKHFGYSSKSWMILTK 79
LMAL +VF P+ P + E TLS PT YSSK + L K
Sbjct: 87 LMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAK 139
>UniRef50_Q3KPN0 Cluster: LOC733385 protein; n=2; Xenopus
laevis|Rep: LOC733385 protein - Xenopus laevis (African
clawed frog)
Length = 446
Score = 31.9 bits (69), Expect = 8.2
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +1
Query: 187 LQYRAHGKKHYDAQSHQRPPGQ-HPALEKLLPHIK----GNVGFVFTRGDLVEVVTNCWR 351
L+ + K +A H+ Q A++ LL + K GNV + D + ++ WR
Sbjct: 1 LEAHVYSCKMSEAGGHELDSEQVKKAVQALLAYQKKKEDGNV-LLLNEHDRISLMLTVWR 59
Query: 352 TKSRLQLVPVPLPH 393
SR Q + +PLPH
Sbjct: 60 IPSREQTIRIPLPH 73
>UniRef50_Q7NAE7 Cluster: PutA; n=1; Mycoplasma gallisepticum|Rep:
PutA - Mycoplasma gallisepticum
Length = 476
Score = 31.9 bits (69), Expect = 8.2
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Frame = +2
Query: 107 EYPKCFIVGADNVGSQQMQQ-------IRISLRGSSIALMGKNTMMRKAIKDHL 247
+Y F G+ NVG + MQQ + + L G S ++ NT + KA+K L
Sbjct: 203 KYDHIFFTGSSNVGKKVMQQAATHLTPVTLELGGKSPCIVDTNTDLEKAVKSFL 256
>UniRef50_Q6MIX4 Cluster: Motility protein A; n=1; Bdellovibrio
bacteriovorus|Rep: Motility protein A - Bdellovibrio
bacteriovorus
Length = 293
Score = 31.9 bits (69), Expect = 8.2
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 223 AQSHQRPPGQHPALEKLLPH------IKGNVGFVFTRGDLVEVVTNCWRTKSRLQLVPVP 384
+++++R P PAL K H +K V + F +L +V+TN R K + +
Sbjct: 110 SEAYRRDPKSVPALMKPETHPFIKDGVKLLVEYGFNYDELADVLTNALRGKKKRDDEEIK 169
Query: 385 LPHCQSSFPP 414
+ H S FPP
Sbjct: 170 VWHTMSRFPP 179
>UniRef50_Q0LCN2 Cluster: Primosomal protein N'; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Primosomal protein N' -
Herpetosiphon aurantiacus ATCC 23779
Length = 829
Score = 31.9 bits (69), Expect = 8.2
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 47 REDKATWKSNYFVKIIQL--LDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
+E + TW+ + I+L LDE + + VG Q +Q+R+ LRGS L T
Sbjct: 108 QEIERTWRPTEHGQKIELGTLDERERAILFHLRRVGEQSERQLRVDLRGSDADLRRSYTE 167
Query: 221 MRK 229
+ +
Sbjct: 168 LHE 170
>UniRef50_A1BCK6 Cluster: Putative uncharacterized protein; n=2;
Chlorobium|Rep: Putative uncharacterized protein -
Chlorobium phaeobacteroides (strain DSM 266)
Length = 908
Score = 31.9 bits (69), Expect = 8.2
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 89 IIQLLDEYPKCFI-VGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDHLDNIQPS 265
+I DE P+ F V A GS + R+ G I GKNT+M + K+ L +IQ
Sbjct: 833 VINPEDEKPQTFSKVMATVTGSWWKDRQRVETIGDVIVRPGKNTLMLRTTKNALPHIQEF 892
Query: 266 R 268
R
Sbjct: 893 R 893
>UniRef50_Q0CGY8 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 1240
Score = 31.9 bits (69), Expect = 8.2
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 116 KCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAIKDHLD 250
+ +VG + SQQ Q+ + +S+AL G++ M K I ++L+
Sbjct: 823 RTLVVGRRRLSSQQYQEFTTKYKQASLALHGRDVGMAKVIGEYLE 867
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,559,765
Number of Sequences: 1657284
Number of extensions: 11444902
Number of successful extensions: 36899
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 35342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36858
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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