Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0718.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.50 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   1.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   1.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   4.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   6.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 107  EYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTMMRKAI 235
            EYPKC+ V  +       +     +R  S A   KN ++  A+
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAV 2485



 Score = 20.6 bits (41), Expect = 8.1
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = -3

Query: 392  WGNGTGTSWSLDFVLQQFVTTSTRSPRVNTKPT 294
            W + T + W      ++  TT   +    T+PT
Sbjct: 1043 WSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPT 1075


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 368 WSLDFVLQQFVTTSTRSPRVNTKPTLPLMCGNSFS 264
           WS  F++ + V       +VN + T P++  NS S
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVS 358


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 368 WSLDFVLQQFVTTSTRSPRVNTKPTLPLMCGNSFS 264
           WS  F++ + V       +VN + T P++  NS S
Sbjct: 324 WSFGFLIVRTVCLCLFGGKVNDESTQPMLVLNSVS 358


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 417 LWRE*RLTMGQWHRDELEPGLCS 349
           +W   RL  G++  ++++P LC+
Sbjct: 28  IWSTYRLNNGKFTVEDIDPTLCT 50


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 74  NYFVKIIQLLDEYPKCF 124
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 308 NTKPTLPLMCGNSFSR 261
           N KP +  +CG S++R
Sbjct: 246 NQKPNVCRICGKSYAR 261


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -2

Query: 414 WRE*RLTMGQWHRDELEPGLCS 349
           W   R   G++H   ++P +C+
Sbjct: 33  WAIYRPDKGEYHPKNIDPNICT 54


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 395 QWGNGTGTSW 366
           Q+GNG  TSW
Sbjct: 274 QFGNGLETSW 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,155
Number of Sequences: 336
Number of extensions: 2640
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)