Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0718.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 151 1e-36
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 151 1e-36
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 151 1e-36
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 151 1e-36
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 151 1e-36
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 151 2e-36
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 150 2e-36
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 147 2e-35
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 33 0.55
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 33 0.55
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 33 0.55
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 33 0.55
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 33 0.55
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 33 0.55
X99101-1|CAA67555.1| 477|Homo sapiens estrogen receptor beta pr... 30 3.9
DQ838583-1|ABH09190.1| 472|Homo sapiens estrogen receptor beta ... 30 3.9
DQ838582-1|ABH09189.1| 481|Homo sapiens estrogen receptor beta ... 30 3.9
DQ777076-1|ABG88022.1| 474|Homo sapiens estrogen receptor beta ... 30 3.9
BC024181-1|AAH24181.1| 323|Homo sapiens ESR2 protein protein. 30 3.9
AY785359-1|AAV31779.1| 530|Homo sapiens estrogen receptor 2 (ER... 30 3.9
AF215937-2|AAG29940.1| 530|Homo sapiens 5p152 protein. 30 3.9
AF124790-1|AAD32580.1| 323|Homo sapiens estrogen receptor beta2... 30 3.9
AF074599-1|AAC25603.1| 381|Homo sapiens estrogen receptor beta ... 30 3.9
AF060555-1|AAC15234.1| 513|Homo sapiens estrogen receptor beta ... 30 3.9
AF051428-1|AAC05751.1| 495|Homo sapiens estrogen receptor beta2... 30 3.9
AF051427-1|AAC05985.1| 530|Homo sapiens estrogen receptor beta ... 30 3.9
AB209620-1|BAD92857.1| 504|Homo sapiens estrogen receptor 2 (ER... 30 3.9
AB006590-1|BAA24953.1| 530|Homo sapiens estrogen receptor beta ... 30 3.9
AB006589-1|BAA31966.1| 495|Homo sapiens estrogen receptor beta ... 30 3.9
BC028355-1|AAH28355.1| 714|Homo sapiens Mdm4, transformed 3T3 c... 29 6.8
BX537652-1|CAD97804.1| 793|Homo sapiens hypothetical protein pr... 29 9.0
BC042613-1|AAH42613.1| 753|Homo sapiens CCDC14 protein protein. 29 9.0
BC040285-1|AAH40285.1| 753|Homo sapiens CCDC14 protein protein. 29 9.0
AL833312-1|CAD91162.1| 455|Homo sapiens hypothetical protein pr... 29 9.0
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 151 bits (367), Expect = 1e-36
Identities = 81/152 (53%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N P+ R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLEN-NPALEKLLPLRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 118
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 119 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 150
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 98 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 152
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 151 bits (367), Expect = 1e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 151 bits (365), Expect = 2e-36
Identities = 80/152 (52%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFSQALGITTKISRGT 151
Score = 41.9 bits (94), Expect = 0.001
Identities = 24/55 (43%), Positives = 26/55 (47%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K + K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIE 153
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 150 bits (364), Expect = 2e-36
Identities = 79/152 (51%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++ LMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N R + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 147 bits (356), Expect = 2e-35
Identities = 79/152 (51%), Positives = 95/152 (62%), Gaps = 2/152 (1%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG + LMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 221 MRKAIKDHLDNIQPSRNCCHTSRATLASCSPAE--TXLRS*QTVGEQSPGSSSSRCHCPI 394
MRKAI+ HL+N + E T +R + + P ++ + P
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRD-MLLANKVPAAARAGAIAPC 119
Query: 395 VSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
NTGLGPEKT QAL I K +GT
Sbjct: 120 EVTVPAQNTGLGPEKTSFFQALGITTKISRGT 151
Score = 44.0 bits (99), Expect = 3e-04
Identities = 24/55 (43%), Positives = 27/55 (49%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RD LL NKV A AR GAIAP V +PA K ++ K RG IE
Sbjct: 99 RDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIE 153
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 33.1 bits (72), Expect = 0.55
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKP 443
+DK E+K++APA P + P + +P +PA+ R P
Sbjct: 696 KDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVP 732
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 33.1 bits (72), Expect = 0.55
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKP 443
+DK E+K++APA P + P + +P +PA+ R P
Sbjct: 639 KDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVP 675
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 33.1 bits (72), Expect = 0.55
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKP 443
+DK E+K++APA P + P + +P +PA+ R P
Sbjct: 639 KDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVP 675
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 33.1 bits (72), Expect = 0.55
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKP 443
+DK E+K++APA P + P + +P +PA+ R P
Sbjct: 639 KDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVP 675
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 33.1 bits (72), Expect = 0.55
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKP 443
+DK E+K++APA P + P + +P +PA+ R P
Sbjct: 617 KDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVP 653
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 33.1 bits (72), Expect = 0.55
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKP 443
+DK E+K++APA P + P + +P +PA+ R P
Sbjct: 639 KDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVP 675
>X99101-1|CAA67555.1| 477|Homo sapiens estrogen receptor beta
protein.
Length = 477
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 115 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 172
Query: 386 CPIVSR 403
+V R
Sbjct: 173 YRLVRR 178
>DQ838583-1|ABH09190.1| 472|Homo sapiens estrogen receptor beta
isoform 5 protein.
Length = 472
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>DQ838582-1|ABH09189.1| 481|Homo sapiens estrogen receptor beta
isoform 4 protein.
Length = 481
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>DQ777076-1|ABG88022.1| 474|Homo sapiens estrogen receptor beta 4
protein.
Length = 474
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>BC024181-1|AAH24181.1| 323|Homo sapiens ESR2 protein protein.
Length = 323
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AY785359-1|AAV31779.1| 530|Homo sapiens estrogen receptor 2 (ER
beta) protein.
Length = 530
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AF215937-2|AAG29940.1| 530|Homo sapiens 5p152 protein.
Length = 530
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AF124790-1|AAD32580.1| 323|Homo sapiens estrogen receptor beta2
splice variant protein.
Length = 323
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AF074599-1|AAC25603.1| 381|Homo sapiens estrogen receptor beta
isoform 5/6 protein.
Length = 381
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 110 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 167
Query: 386 CPIVSR 403
+V R
Sbjct: 168 YRLVRR 173
>AF060555-1|AAC15234.1| 513|Homo sapiens estrogen receptor beta 3
isoform protein.
Length = 513
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AF051428-1|AAC05751.1| 495|Homo sapiens estrogen receptor beta2
splice variant protein.
Length = 495
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AF051427-1|AAC05985.1| 530|Homo sapiens estrogen receptor beta
protein.
Length = 530
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AB209620-1|BAD92857.1| 504|Homo sapiens estrogen receptor 2 (ER
beta) variant protein.
Length = 504
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 200 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 257
Query: 386 CPIVSR 403
+V R
Sbjct: 258 YRLVRR 263
>AB006590-1|BAA24953.1| 530|Homo sapiens estrogen receptor beta
protein.
Length = 530
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>AB006589-1|BAA31966.1| 495|Homo sapiens estrogen receptor beta cx
protein.
Length = 495
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +2
Query: 206 GKNTMMRKAIKDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCH 385
G +++I+ H D I P+ N C + SC LR VG GS RC
Sbjct: 168 GCKAFFKRSIQGHNDYICPATNQCTIDKNRRKSCQACR--LRKCYEVGMVKCGSRRERCG 225
Query: 386 CPIVSR 403
+V R
Sbjct: 226 YRLVRR 231
>BC028355-1|AAH28355.1| 714|Homo sapiens Mdm4, transformed 3T3 cell
double minute 1, p53 binding protein (mouse) protein.
Length = 714
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 236 KDHLDNIQPSRNCCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCHCPIVSRHSRH 415
+DHL+ I NCC +T +S + +R+ G+ P S + CP +
Sbjct: 357 RDHLNQILSDSNCCWDVSSTTSSEGTVSSNIRALDLAGD--PTSHKTLQKCPSTEPEEKG 414
Query: 416 N 418
N
Sbjct: 415 N 415
>BX537652-1|CAD97804.1| 793|Homo sapiens hypothetical protein
protein.
Length = 793
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 175 LATWLQ-YRAHGKK-HYDAQSHQRPPGQHPA 261
+ T+L +R+HGK+ H D+Q+H+ P PA
Sbjct: 191 IQTYLSLFRSHGKEPHLDSQTHRSPTQSQPA 221
>BC042613-1|AAH42613.1| 753|Homo sapiens CCDC14 protein protein.
Length = 753
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 175 LATWLQ-YRAHGKK-HYDAQSHQRPPGQHPA 261
+ T+L +R+HGK+ H D+Q+H+ P PA
Sbjct: 151 IQTYLSLFRSHGKEPHLDSQTHRSPTQSQPA 181
>BC040285-1|AAH40285.1| 753|Homo sapiens CCDC14 protein protein.
Length = 753
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 175 LATWLQ-YRAHGKK-HYDAQSHQRPPGQHPA 261
+ T+L +R+HGK+ H D+Q+H+ P PA
Sbjct: 151 IQTYLSLFRSHGKEPHLDSQTHRSPTQSQPA 181
>AL833312-1|CAD91162.1| 455|Homo sapiens hypothetical protein
protein.
Length = 455
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 175 LATWLQ-YRAHGKK-HYDAQSHQRPPGQHPA 261
+ T+L +R+HGK+ H D+Q+H+ P PA
Sbjct: 151 IQTYLSLFRSHGKEPHLDSQTHRSPTQSQPA 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,545,466
Number of Sequences: 237096
Number of extensions: 1807564
Number of successful extensions: 8339
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 8053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8300
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -