Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0718.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 129 2e-30
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 129 2e-30
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 129 2e-30
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 129 2e-30
AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p pro... 33 0.28
AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA... 33 0.28
AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p pro... 31 0.65
AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative tra... 31 0.65
AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA... 31 0.65
AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein. 31 0.65
AY061514-1|AAL29062.1| 1088|Drosophila melanogaster LD46758p pro... 29 2.6
AE014134-640|AAS64614.1| 1088|Drosophila melanogaster CG10033-PI... 29 2.6
AE014134-639|AAS64613.1| 1088|Drosophila melanogaster CG10033-PH... 29 2.6
AE014134-638|AAF51082.2| 1088|Drosophila melanogaster CG10033-PA... 29 2.6
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 129 bits (311), Expect = 2e-30
Identities = 75/156 (48%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++ LMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 221 MRKAIKDHLD-NIQPSRNCCHTSR-----ATLASCSPAETXLRS*QTVGEQSPGSSSSRC 382
MRKAI+ HL+ N Q + H T + L + PG+ +
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAP-L 119
Query: 383 HCPIVSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
H I ++ NTGLGPEKT QAL I K KGT
Sbjct: 120 HVIIPAQ----NTGLGPEKTSFFQALSIPTKISKGT 151
Score = 61.3 bits (142), Expect = 7e-10
Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 HPALEKLLPHIKGNVGFVFTRGDLVEVVTNCWRTKSRLQLVPVPLPHCQSSFPPQHRPRS 432
+P LEKLLPHIKGNVGFVFT+GDL EV +K R P + P Q+
Sbjct: 72 NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLG 131
Query: 433 RENLXLTSSFH-PTKXSKG 486
E + PTK SKG
Sbjct: 132 PEKTSFFQALSIPTKISKG 150
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RDKLLE+KV+APARPGAIAPL V+IPA K ++ S K +G IE
Sbjct: 99 RDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIE 153
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 129 bits (311), Expect = 2e-30
Identities = 75/156 (48%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++ LMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 221 MRKAIKDHLD-NIQPSRNCCHTSR-----ATLASCSPAETXLRS*QTVGEQSPGSSSSRC 382
MRKAI+ HL+ N Q + H T + L + PG+ +
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAP-L 119
Query: 383 HCPIVSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
H I ++ NTGLGPEKT QAL I K KGT
Sbjct: 120 HVIIPAQ----NTGLGPEKTSFFQALSIPTKISKGT 151
Score = 61.3 bits (142), Expect = 7e-10
Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 HPALEKLLPHIKGNVGFVFTRGDLVEVVTNCWRTKSRLQLVPVPLPHCQSSFPPQHRPRS 432
+P LEKLLPHIKGNVGFVFT+GDL EV +K R P + P Q+
Sbjct: 72 NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLG 131
Query: 433 RENLXLTSSFH-PTKXSKG 486
E + PTK SKG
Sbjct: 132 PEKTSFFQALSIPTKISKG 150
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RDKLLE+KV+APARPGAIAPL V+IPA K ++ S K +G IE
Sbjct: 99 RDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIE 153
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 129 bits (311), Expect = 2e-30
Identities = 75/156 (48%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++ LMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 221 MRKAIKDHLD-NIQPSRNCCHTSR-----ATLASCSPAETXLRS*QTVGEQSPGSSSSRC 382
MRKAI+ HL+ N Q + H T + L + PG+ +
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAP-L 119
Query: 383 HCPIVSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
H I ++ NTGLGPEKT QAL I K KGT
Sbjct: 120 HVIIPAQ----NTGLGPEKTSFFQALSIPTKISKGT 151
Score = 61.3 bits (142), Expect = 7e-10
Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 HPALEKLLPHIKGNVGFVFTRGDLVEVVTNCWRTKSRLQLVPVPLPHCQSSFPPQHRPRS 432
+P LEKLLPHIKGNVGFVFT+GDL EV +K R P + P Q+
Sbjct: 72 NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLG 131
Query: 433 RENLXLTSSFH-PTKXSKG 486
E + PTK SKG
Sbjct: 132 PEKTSFFQALSIPTKISKG 150
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RDKLLE+KV+APARPGAIAPL V+IPA K ++ S K +G IE
Sbjct: 99 RDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIE 153
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 129 bits (311), Expect = 2e-30
Identities = 75/156 (48%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Frame = +2
Query: 41 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIALMGKNTM 220
M RE+KA WK+ YF+K+++L DE+PKCFIVGADNVGS+QMQ IR SLRG ++ LMGKNTM
Sbjct: 1 MVRENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTM 60
Query: 221 MRKAIKDHLD-NIQPSRNCCHTSR-----ATLASCSPAETXLRS*QTVGEQSPGSSSSRC 382
MRKAI+ HL+ N Q + H T + L + PG+ +
Sbjct: 61 MRKAIRGHLENNPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAP-L 119
Query: 383 HCPIVSRHSRHNTGLGPEKTXXLQALFILPKXQKGT 490
H I ++ NTGLGPEKT QAL I K KGT
Sbjct: 120 HVIIPAQ----NTGLGPEKTSFFQALSIPTKISKGT 151
Score = 61.3 bits (142), Expect = 7e-10
Identities = 35/79 (44%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 HPALEKLLPHIKGNVGFVFTRGDLVEVVTNCWRTKSRLQLVPVPLPHCQSSFPPQHRPRS 432
+P LEKLLPHIKGNVGFVFT+GDL EV +K R P + P Q+
Sbjct: 72 NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLHVIIPAQNTGLG 131
Query: 433 RENLXLTSSFH-PTKXSKG 486
E + PTK SKG
Sbjct: 132 PEKTSFFQALSIPTKISKG 150
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = +3
Query: 333 RDKLLENKVQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
RDKLLE+KV+APARPGAIAPL V+IPA K ++ S K +G IE
Sbjct: 99 RDKLLESKVRAPARPGAIAPLHVIIPAQNTGLGPEKTSFFQALSIPTKISKGTIE 153
>AY061517-1|AAL29065.1| 256|Drosophila melanogaster LD47064p
protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 14 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 193
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 194 IALMGKNTMMR 226
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AE013599-1019|AAF58844.1| 256|Drosophila melanogaster CG1381-PA
protein.
Length = 256
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 14 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 193
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 194 IALMGKNTMMR 226
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p
protein.
Length = 502
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 251 NIQPSRN--CCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCHCPIVSRHSRHN 418
N PS N CH S ++ SC+ + ++ G SPGS+SS H P V HN
Sbjct: 103 NTLPSSNNSSCHNSSSSSNSCNSNQVPIQVPILSG--SPGSTSSASHIPHVPFAYHHN 158
>AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative
transcription factor protein.
Length = 704
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 251 NIQPSRN--CCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCHCPIVSRHSRHN 418
N PS N CH S ++ SC+ + ++ G SPGS+SS H P V HN
Sbjct: 305 NTLPSSNNSSCHNSSSSSNSCNSNQVPIQVPILSG--SPGSTSSASHIPHVPFAYHHN 360
>AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA
protein.
Length = 704
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 251 NIQPSRN--CCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCHCPIVSRHSRHN 418
N PS N CH S ++ SC+ + ++ G SPGS+SS H P V HN
Sbjct: 305 NTLPSSNNSSCHNSSSSSNSCNSNQVPIQVPILSG--SPGSTSSASHIPHVPFAYHHN 360
>AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein.
Length = 704
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 251 NIQPSRN--CCHTSRATLASCSPAETXLRS*QTVGEQSPGSSSSRCHCPIVSRHSRHN 418
N PS N CH S ++ SC+ + ++ G SPGS+SS H P V HN
Sbjct: 305 NTLPSSNNSSCHNSSSSSNSCNSNQVPIQVPILSG--SPGSTSSASHIPHVPFAYHHN 360
>AY061514-1|AAL29062.1| 1088|Drosophila melanogaster LD46758p
protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 357 VQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
V AP RP + +V P TPA ++P ++ YQK + +I+
Sbjct: 30 VDAPPRPADVDVATV--PVATPAPPPQQPVSNLFYADYQKLQPAIID 74
>AE014134-640|AAS64614.1| 1088|Drosophila melanogaster CG10033-PI,
isoform I protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 357 VQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
V AP RP + +V P TPA ++P ++ YQK + +I+
Sbjct: 30 VDAPPRPADVDVATV--PVATPAPPPQQPVSNLFYADYQKLQPAIID 74
>AE014134-639|AAS64613.1| 1088|Drosophila melanogaster CG10033-PH,
isoform H protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 357 VQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
V AP RP + +V P TPA ++P ++ YQK + +I+
Sbjct: 30 VDAPPRPADVDVATV--PVATPAPPPQQPVSNLFYADYQKLQPAIID 74
>AE014134-638|AAF51082.2| 1088|Drosophila melanogaster CG10033-PA,
isoform A protein.
Length = 1088
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 357 VQAPARPGAIAPLSVVIPATTPASVQRKPXXYKLFSSYQKXKRGLIE 497
V AP RP + +V P TPA ++P ++ YQK + +I+
Sbjct: 30 VDAPPRPADVDVATV--PVATPAPPPQQPVSNLFYADYQKLQPAIID 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,744,397
Number of Sequences: 53049
Number of extensions: 536238
Number of successful extensions: 2719
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2715
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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