Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0716.Seq
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    25   1.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   4.4  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   5.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   5.9  
DQ986315-1|ABK59975.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980210-1|ABL09378.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980209-1|ABL09377.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980208-1|ABL09376.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980207-1|ABL09375.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980206-1|ABL09374.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980205-1|ABL09373.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980204-1|ABL09372.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980203-1|ABL09371.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980202-1|ABL09370.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980201-1|ABL09369.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980200-1|ABL09368.1|  504|Anopheles gambiae catalase protein.        23   7.8  
DQ980199-1|ABL09367.1|  504|Anopheles gambiae catalase protein.        23   7.8  
AY505416-1|AAR90327.1|  485|Anopheles gambiae catalase 1 protein.      23   7.8  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   7.8  

>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 609 YTAIGAGNTXXCGTRLCPSNCSSLK 535
           + A  AG    CG  LCP N ++LK
Sbjct: 495 HVAPRAGLLRDCGLELCPDNRAALK 519


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
 Frame = -3

Query: 437 RLLPSLDVVAVSQAPSPESNPD--SPLPVTTMVVAETTIES**GRHLKDASPVLDHAICK 264
           RL   +++  +S  P P ++P   SP  +   + A    +S     + + S  L H  CK
Sbjct: 354 RLRWMMEMPGMSVPPQPHTHPSYGSPAEIPKHISALGAKQS--KMEVMELSD-LHHPNCK 410

Query: 263 SYPIHQN*RLRTRGPPSIGFDLIKALIPSLVRVLIACISSRITTVIQVTE*DLRNQN*YI 84
                 N +L + G   IG D  +    S   +L++  +S+ T  ++     LRN++ YI
Sbjct: 411 -----MNRKLNS-GDLGIGADSCRRESESSDSILLSPEASKATEAVEFIAEHLRNEDLYI 464

Query: 83  E 81
           +
Sbjct: 465 Q 465


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 576 CGTRLCPSNCSSLK 535
           CG  LCP N ++LK
Sbjct: 550 CGLELCPDNRAALK 563


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +1

Query: 454 PARGGSDEK*PIGTLTRPLIGMSHFKYF*RGTIGGAKS 567
           PAR  +D     GT   PL   +    +  G+IGG  S
Sbjct: 787 PARCPADTNGDAGTPGNPLSSSTSSSLYPNGSIGGVNS 824


>DQ986315-1|ABK59975.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980210-1|ABL09378.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980209-1|ABL09377.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980208-1|ABL09376.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980207-1|ABL09375.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980206-1|ABL09374.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980205-1|ABL09373.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980204-1|ABL09372.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980203-1|ABL09371.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980202-1|ABL09370.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980201-1|ABL09369.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980200-1|ABL09368.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>DQ980199-1|ABL09367.1|  504|Anopheles gambiae catalase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 465 HLKDASPFLQERAVKNF 481


>AY505416-1|AAR90327.1|  485|Anopheles gambiae catalase 1 protein.
          Length = 485

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 308 HLKDASPVLDHAICKSY 258
           HLKDASP L     K++
Sbjct: 449 HLKDASPFLQERAVKNF 465


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -3

Query: 464 PRAGSG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVAETTIES 321
           P A S   A  +P LDV+    AP P  + D P  VT     E+ +ES
Sbjct: 283 PAATSAPLAFKVP-LDVLP---APFPGPSTDEPRTVTRKRTTESDVES 326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,453
Number of Sequences: 2352
Number of extensions: 14916
Number of successful extensions: 66
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)