Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0712.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752908-1|AAV30082.1|  103|Anopheles gambiae peroxidase 13B pro...    53   7e-09
AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10 prot...    36   0.001
AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B prot...    33   0.008
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    25   1.2  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    25   1.2  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   2.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   5.0  

>AY752908-1|AAV30082.1|  103|Anopheles gambiae peroxidase 13B
           protein.
          Length = 103

 Score = 52.8 bits (121), Expect = 7e-09
 Identities = 29/81 (35%), Positives = 42/81 (51%)
 Frame = +1

Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
           +P Y +Y  LC+    +TW+D+ + I  + I  L+ IY    D++L  G   ERP++GG 
Sbjct: 21  MPSYNNYRALCNLKRAQTWEDLGREIPPEVIARLRRIYAHVDDIDLFPGGMSERPLQGGL 80

Query: 442 RSXTAAXIINKQLSLTMKADR 504
              T A II  Q     K DR
Sbjct: 81  VGPTFACIIAIQFRQLRKCDR 101


>AY752904-1|AAV30078.1|   84|Anopheles gambiae peroxidase 10
           protein.
          Length = 84

 Score = 35.5 bits (78), Expect = 0.001
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +1

Query: 361 LQEIYETPGDVELLAGIWIERPMEGGYRSXTAAXIINKQLSLTMKADRH 507
           L+ +Y  P DV+L  G  +E P++GG    T A +I  Q +   + DR+
Sbjct: 7   LRALYPHPDDVDLYVGGILEPPVDGGVVGETFAELIADQFAKFQRGDRY 55


>AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B
           protein.
          Length = 107

 Score = 32.7 bits (71), Expect = 0.008
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
 Frame = +1

Query: 271 YVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGYR-S 447
           Y D+ +LC       W+D+   I    ++ L   Y+T  DVEL     +E   E G    
Sbjct: 21  YNDFRELCGLGRATRWEDLYGEIPRATVDRLARWYDTVDDVELAVAGALESHREAGATVG 80

Query: 448 XTAAXIINKQLSLTMKADR 504
            T   I+ +Q   T   DR
Sbjct: 81  PTFLCILLEQFRRTRTGDR 99


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 332 NSLTWIELKVCKKFTKPLVTWNSWQE 409
           N + ++ + VC +FT+P     SW+E
Sbjct: 445 NDVYFLRMAVCSRFTEPADIDYSWKE 470


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 332 NSLTWIELKVCKKFTKPLVTWNSWQE 409
           N + ++ + VC +FT+P     SW+E
Sbjct: 476 NDVYFLRMAVCSRFTEPADIDYSWKE 501


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 179 PGLQLYHYLLQPDSKFLVSFLPSSYLSSRNQYV 81
           P   L+ +LL  +     SF+   Y+S RN+ +
Sbjct: 215 PRRNLFDHLLPDNLSLFASFVTQHYVSRRNRII 247


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 128  RGTYYQAGGDNDRAVDPAICDKGLGIMQKASDLTAADLRKNQLS 259
            R T  Q G D +R V+ +    G+GI    + + A     NQLS
Sbjct: 1057 RTTNDQEGNDMEREVETSDEFTGIGIRVSFTQVDAEMREMNQLS 1100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,084
Number of Sequences: 2352
Number of extensions: 11904
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)