Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0712.Seq
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132813-1|AAI32814.1| 515|Homo sapiens peroxidasin homolog (Dr... 44 3e-04
AY877349-1|AAX70929.1| 1463|Homo sapiens cardiac peroxidase prot... 44 3e-04
AK131524-1|BAD18663.1| 515|Homo sapiens protein ( Homo sapiens ... 44 3e-04
AK058200-1|BAB71713.1| 494|Homo sapiens protein ( Homo sapiens ... 44 3e-04
U80017-2|AAC52047.1| 1403|Homo sapiens neuronal apoptosis inhibi... 33 0.87
U19251-1|AAC52045.1| 1403|Homo sapiens neuronal apoptosis inhibi... 33 0.87
AC005031-1|AAC62261.1| 1178|Homo sapiens neuronal apoptosis inhi... 33 0.87
AB209123-1|BAD92360.1| 837|Homo sapiens baculoviral IAP repeat-... 33 0.87
AB048534-1|BAB87181.1| 1160|Homo sapiens psi neuronal apoptosis ... 33 0.87
AJ972372-1|CAI99856.1| 115|Homo sapiens immunoglobulin kappa li... 30 4.6
BC101038-1|AAI01039.1| 871|Homo sapiens protocadherin gamma sub... 29 8.1
BC101036-1|AAI01037.1| 870|Homo sapiens PCDHGC4 protein protein. 29 8.1
BC101035-1|AAI01036.1| 871|Homo sapiens protocadherin gamma sub... 29 8.1
AY928164-1|AAZ32313.1| 123|Homo sapiens immunoglobulin kappa li... 29 8.1
AJ972374-1|CAI99858.1| 113|Homo sapiens immunoglobulin kappa li... 29 8.1
AF152525-1|AAD43785.1| 871|Homo sapiens protocadherin gamma C4 ... 29 8.1
AF152338-1|AAD43732.1| 938|Homo sapiens protocadherin gamma C4 ... 29 8.1
>BC132813-1|AAI32814.1| 515|Homo sapiens peroxidasin homolog
(Drosophila)-like protein.
Length = 515
Score = 44.4 bits (100), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IPPYVD+ C+ +K ++D+ I D + + L+++Y +PGD++L + +E + G
Sbjct: 349 IPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIRQKLRKLYGSPGDIDLWPALMVEDLIPGT 408
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T + Q DR
Sbjct: 409 RVGPTLMCLFVTQFQRLRDGDR 430
>AY877349-1|AAX70929.1| 1463|Homo sapiens cardiac peroxidase protein.
Length = 1463
Score = 44.4 bits (100), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IPPYVD+ C+ +K ++D+ I D + + L+++Y +PGD++L + +E + G
Sbjct: 1150 IPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIRQKLRKLYGSPGDIDLWPALMVEDLIPGT 1209
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T + Q DR
Sbjct: 1210 RVGPTLMCLFVTQFQRLRDGDR 1231
>AK131524-1|BAD18663.1| 515|Homo sapiens protein ( Homo sapiens
cDNA FLJ43518 fis, clone PERIC2009086, moderately
similar to Homo sapiens melanoma-associated antigen MG50
mRNA. ).
Length = 515
Score = 44.4 bits (100), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IPPYVD+ C+ +K ++D+ I D + + L+++Y +PGD++L + +E + G
Sbjct: 349 IPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIRQKLRKLYGSPGDIDLWPALMVEDLIPGT 408
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T + Q DR
Sbjct: 409 RVGPTLMCLFVTQFQRLRDGDR 430
>AK058200-1|BAB71713.1| 494|Homo sapiens protein ( Homo sapiens
cDNA FLJ25471 fis, clone TST09553. ).
Length = 494
Score = 44.4 bits (100), Expect = 3e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IPPYVD+ C+ +K ++D+ I D + + L+++Y +PGD++L + +E + G
Sbjct: 181 IPPYVDFRVFCNLTSVKNFEDLQNEIKDSEIRQKLRKLYGSPGDIDLWPALMVEDLIPGT 240
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T + Q DR
Sbjct: 241 RVGPTLMCLFVTQFQRLRDGDR 262
>U80017-2|AAC52047.1| 1403|Homo sapiens neuronal apoptosis
inhibitory protein protein.
Length = 1403
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 NNAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTWKDMLKF-IDMDRIESLQEIYE 378
N A+ IR Y E AF P+ + V + + + KF + + +SLQ+I +
Sbjct: 584 NRARDIRRYLETILEIKAF---PFYNTVCILRKLFSHNMTRLRKFMVYFGKNQSLQKIQK 640
Query: 379 TPGDVELLAGIWIERPMEGGYRSXTAAXIINKQLSLTMKADRHCMR 516
TP V + W + P + + ++LSL KA ++
Sbjct: 641 TPLFVAAICAHWFQYPFDPSFDDVAVFKSYMERLSLRNKATAEILK 686
>U19251-1|AAC52045.1| 1403|Homo sapiens neuronal apoptosis
inhibitory protein protein.
Length = 1403
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 NNAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTWKDMLKF-IDMDRIESLQEIYE 378
N A+ IR Y E AF P+ + V + + + KF + + +SLQ+I +
Sbjct: 584 NRARDIRRYLETILEIKAF---PFYNTVCILRKLFSHNMTRLRKFMVYFGKNQSLQKIQK 640
Query: 379 TPGDVELLAGIWIERPMEGGYRSXTAAXIINKQLSLTMKADRHCMR 516
TP V + W + P + + ++LSL KA ++
Sbjct: 641 TPLFVAAICAHWFQYPFDPSFDDVAVFKSYMERLSLRNKATAEILK 686
>AC005031-1|AAC62261.1| 1178|Homo sapiens neuronal apoptosis
inhibitory protein protein.
Length = 1178
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 NNAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTWKDMLKF-IDMDRIESLQEIYE 378
N A+ IR Y E AF P+ + V + + + KF + + +SLQ+I +
Sbjct: 363 NRARDIRRYLETILEIKAF---PFYNTVCILRKLFSHNMTRLRKFMVYFGKNQSLQKIQK 419
Query: 379 TPGDVELLAGIWIERPMEGGYRSXTAAXIINKQLSLTMKADRHCMR 516
TP V + W + P + + ++LSL KA ++
Sbjct: 420 TPLFVAAICAHWFQYPFDPSFDDVAVFKSYMERLSLRNKATAEILK 465
>AB209123-1|BAD92360.1| 837|Homo sapiens baculoviral IAP
repeat-containing 1 variant protein.
Length = 837
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 NNAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTWKDMLKF-IDMDRIESLQEIYE 378
N A+ IR Y E AF P+ + V + + + KF + + +SLQ+I +
Sbjct: 18 NRARDIRRYLETILEIKAF---PFYNTVCILRKLFSHNMTRLRKFMVYFGKNQSLQKIQK 74
Query: 379 TPGDVELLAGIWIERPMEGGYRSXTAAXIINKQLSLTMKADRHCMR 516
TP V + W + P + + ++LSL KA ++
Sbjct: 75 TPLFVAAICAHWFQYPFDPSFDDVAVFKSYMERLSLRNKATAEILK 120
>AB048534-1|BAB87181.1| 1160|Homo sapiens psi neuronal apoptosis
inhibitory protein protein.
Length = 1160
Score = 32.7 bits (71), Expect = 0.87
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 NNAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTWKDMLKF-IDMDRIESLQEIYE 378
N A+ IR Y E AF P+ + V + + + KF + + +SLQ+I +
Sbjct: 422 NRARDIRRYLETILEIKAF---PFYNTVCILRKLFSHNMTRLRKFMVYFGKNQSLQKIQK 478
Query: 379 TPGDVELLAGIWIERPMEGGYRSXTAAXIINKQLSLTMKADRHCMR 516
TP V + W + P + + ++LSL KA ++
Sbjct: 479 TPLFVAAICAHWFQYPFDPSFDDVAVFKSYMERLSLRNKATAEILK 524
>AJ972372-1|CAI99856.1| 115|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 115
Score = 30.3 bits (65), Expect = 4.6
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 281 T*NCAMMSKLKHGKTC*NSLTWIELKVCKKFTKPLVTWNSWQESGLKD 424
T NC + H NSL W + K + K L+ W S +ESG+ D
Sbjct: 20 TINCKSSQSVLHSSNNKNSLAWYQQKPGQP-PKLLIYWASTRESGVPD 66
>BC101038-1|AAI01039.1| 871|Homo sapiens protocadherin gamma
subfamily C, 4 protein.
Length = 871
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 243 LKSAAVRSDAFCIIPNPLSQMAGSTALSLSPPA 145
L SA RSD+F ++ +P + MAG PP+
Sbjct: 775 LASAPTRSDSFMMVKSPSAPMAGEPVRPSCPPS 807
>BC101036-1|AAI01037.1| 870|Homo sapiens PCDHGC4 protein protein.
Length = 870
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 243 LKSAAVRSDAFCIIPNPLSQMAGSTALSLSPPA 145
L SA RSD+F ++ +P + MAG PP+
Sbjct: 774 LASAPTRSDSFMMVKSPSAPMAGEPVRPSCPPS 806
>BC101035-1|AAI01036.1| 871|Homo sapiens protocadherin gamma
subfamily C, 4 protein.
Length = 871
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 243 LKSAAVRSDAFCIIPNPLSQMAGSTALSLSPPA 145
L SA RSD+F ++ +P + MAG PP+
Sbjct: 775 LASAPTRSDSFMMVKSPSAPMAGEPVRPSCPPS 807
>AY928164-1|AAZ32313.1| 123|Homo sapiens immunoglobulin kappa light
chain protein.
Length = 123
Score = 29.5 bits (63), Expect = 8.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 281 T*NCAMMSKLKHGKTC*NSLTWIELKVCKKFTKPLVTWNSWQESGLKD 424
T NC + H NSLTW + K + K L+ W S + SG+ D
Sbjct: 19 TINCKSSHSVLHSSNNKNSLTWYQQKPGQP-PKLLIYWASTRASGVPD 65
>AJ972374-1|CAI99858.1| 113|Homo sapiens immunoglobulin kappa light
chain variable region protein.
Length = 113
Score = 29.5 bits (63), Expect = 8.1
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 281 T*NCAMMSKLKHGKTC*NSLTWIELKVCKKFTKPLVTWNSWQESGLKD 424
T NC + +G N L W +LK + K L+ W S +ESG+ D
Sbjct: 20 TVNCRSSQSVLYGPNNKNYLAWYQLKPGQP-PKLLIYWASIRESGVPD 66
>AF152525-1|AAD43785.1| 871|Homo sapiens protocadherin gamma C4
short form protein protein.
Length = 871
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 243 LKSAAVRSDAFCIIPNPLSQMAGSTALSLSPPA 145
L SA RSD+F ++ +P + MAG PP+
Sbjct: 775 LASAPTRSDSFMMVKSPSAPMAGEPVRPSCPPS 807
>AF152338-1|AAD43732.1| 938|Homo sapiens protocadherin gamma C4
protein.
Length = 938
Score = 29.5 bits (63), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 243 LKSAAVRSDAFCIIPNPLSQMAGSTALSLSPPA 145
L SA RSD+F ++ +P + MAG PP+
Sbjct: 775 LASAPTRSDSFMMVKSPSAPMAGEPVRPSCPPS 807
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,747,410
Number of Sequences: 237096
Number of extensions: 1663646
Number of successful extensions: 3337
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3337
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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