Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0712.Seq
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical pr... 54 7e-08
AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical ... 52 2e-07
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 47 1e-05
Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical pr... 40 0.002
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 39 0.002
U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical pr... 34 0.077
Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 29 2.9
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 29 2.9
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 29 2.9
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 3.9
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 27 6.7
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 27 6.7
AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical ... 27 6.7
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 27 6.7
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/94 (30%), Positives = 48/94 (51%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
IPPY Y C + ++ + I+ D + ++ ++YE+P D++L GI E+ + GG
Sbjct: 1078 IPPYNHYRSFCGLSRLTSFYSIFSDINQDGLTAIGKVYESPDDIDLFTGIVSEKTIPGGI 1137
Query: 442 RSXTAAXIINKQLSLTMKADRHCMRDRTDPTLFN 543
TAA II +Q K DR + D + F+
Sbjct: 1138 VGPTAACIIAEQFRRLKKCDRFYYENGEDHSKFS 1171
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVEL-LAGIWIERPMEGG 438
I Y + K C E+KT++D++ ID + ++SL+++Y DV+L L GI E P+ G
Sbjct: 402 IATYSQWRKECGGGELKTYEDLIDLIDSNILKSLRDLYPDVLDVDLILLGI-AENPVYGS 460
Query: 439 YRSXTAAXIINKQLSLTMKADRH 507
T I+ Q T D +
Sbjct: 461 LLGPTFGCIMALQFQKTKFGDTY 483
>Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical protein
T06D8.10 protein.
Length = 1490
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/81 (34%), Positives = 39/81 (48%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
+ PY D + C W D+ +D D I LQ +YE+ DV+L G+ ERP+ G
Sbjct: 1269 VQPYNDLREFCGLRRAVKWDDLKGEMDQDNINILQSLYESVDDVDLFPGLVSERPLRGAL 1328
Query: 442 RSXTAAXIINKQLSLTMKADR 504
T + II +Q K DR
Sbjct: 1329 LGTTMSCIIAEQFGRLKKCDR 1349
Score = 47.6 bits (108), Expect = 6e-06
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IP Y C I ++ D+ + F+ + E + Y DV+LL G+ E+P++G
Sbjct: 552 IPGYTALRASCGLGRIASFNDLREIFLPEVKFEQVSSAYTRVEDVDLLVGVLAEKPLKGS 611
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T A II KQ+ T +ADR
Sbjct: 612 LVGPTMACIIGKQMQRTRRADR 633
>Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical protein
T06D8.10 protein.
Length = 1490
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/81 (34%), Positives = 39/81 (48%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
+ PY D + C W D+ +D D I LQ +YE+ DV+L G+ ERP+ G
Sbjct: 1269 VQPYNDLREFCGLRRAVKWDDLKGEMDQDNINILQSLYESVDDVDLFPGLVSERPLRGAL 1328
Query: 442 RSXTAAXIINKQLSLTMKADR 504
T + II +Q K DR
Sbjct: 1329 LGTTMSCIIAEQFGRLKKCDR 1349
Score = 47.6 bits (108), Expect = 6e-06
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IP Y C I ++ D+ + F+ + E + Y DV+LL G+ E+P++G
Sbjct: 552 IPGYTALRASCGLGRIASFNDLREIFLPEVKFEQVSSAYTRVEDVDLLVGVLAEKPLKGS 611
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T A II KQ+ T +ADR
Sbjct: 612 LVGPTMACIIGKQMQRTRRADR 633
>Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical
protein F09F3.5 protein.
Length = 718
Score = 54.0 bits (124), Expect = 7e-08
Identities = 22/79 (27%), Positives = 42/79 (53%)
Frame = +1
Query: 268 PYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGYRS 447
PY+ Y +L + ++ ++ + I++L+ +Y P D++L GI +E P+ GG
Sbjct: 572 PYIQYRQLVGLPTVTSFNELNTTFSQENIQALRNVYSDPADIDLYVGIMLEEPLSGGQLG 631
Query: 448 XTAAXIINKQLSLTMKADR 504
TA+ +I +Q + DR
Sbjct: 632 PTASFMIGEQFRALKRGDR 650
>AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical
protein R08F11.7 protein.
Length = 773
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +1
Query: 268 PYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGYRS 447
PYV Y L + TW D+ + +L+ +Y P D++L G+ +E P+ GG
Sbjct: 629 PYVKYRTLVGLSPVDTWNDLSSTFTAANLAALKTVYADPADIDLYTGLVMETPLAGGQLG 688
Query: 448 XTAAXIINKQLSLTMKADR 504
TA+ II +Q DR
Sbjct: 689 PTASWIIAEQFRALKTGDR 707
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDR-IESLQEIYETPGDVELLAGIWIERPMEGG 438
+P Y +Y K C+ W+DM +I D I+ L+ +Y P +++L G +E +E G
Sbjct: 1066 LPSYTEYRKFCNLPVPVQWEDMKGYIKDDMIIQKLRGLYGVPQNIDLWVGGIVEEKLENG 1125
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T A II +Q DR
Sbjct: 1126 LFGPTFACIIGEQFRKIRDGDR 1147
>Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical
protein F49E12.1 protein.
Length = 655
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = +1
Query: 271 YVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGYRSX 450
Y DY + C+ I ++ D + D + + + ++Y TP D++ G +E+P G
Sbjct: 513 YNDYRRFCNLRPITSFNDWPEVPDENVRQRIGQLYRTPDDLDFYVGGILEQPAAGSLLGA 572
Query: 451 TAAXIINKQLSLTMKADR 504
T A +I KQ DR
Sbjct: 573 TFACVIGKQFERLRDGDR 590
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDR-IESLQEIYETPGDVELLAGIWIERPMEGG 438
+P + +Y K C+ KTW DM + D I LQ +Y +++L G E+
Sbjct: 1101 LPSWTEYRKFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENIDLWVGGVTEKRTADA 1160
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T A II Q DR
Sbjct: 1161 LMGPTLACIIADQFKRLRDGDR 1182
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 41.1 bits (92), Expect = 5e-04
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDR-IESLQEIYETPGDVELLAGIWIERPMEGG 438
+P + +Y K C+ KTW DM + D I LQ +Y +++L G E+
Sbjct: 1101 LPSWTEYRKFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENIDLWVGGVTEKRTADA 1160
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T A II Q DR
Sbjct: 1161 LMGPTLACIIADQFKRLRDGDR 1182
>U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical
protein C16C8.2 protein.
Length = 729
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
+PPY + K C E+K ++ + + I + I++L+ +Y+ +++ G +E P++
Sbjct: 577 VPPYTVWRKFCGLPEVKDFEGLKQVISNQVVIDNLKVVYKHVDAIDMYVGSLLEDPVKDA 636
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T + II +Q T DR
Sbjct: 637 LVGPTLSCIIGEQFKRTRNGDR 658
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
protein C46A5.4 protein.
Length = 1432
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
+P Y+ + C + ++ + F I + +YE+P D+++ G E+P +G
Sbjct: 494 LPSYLQWRTFCKLDDFSSFLALQTIFKPSVNISDFERLYESPEDIDVFVGGLSEQPTKGS 553
Query: 439 YRSXTAAXIINKQLSLTMKADRHCMRDRTDPTLF 540
T A + Q++ T + DR + P+ F
Sbjct: 554 LLGPTFACLFAHQMAQTKRGDRFWYENFVSPSAF 587
>U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical
protein ZK430.8 protein.
Length = 724
Score = 33.9 bits (74), Expect = 0.077
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IP Y + C T+ D I D + L Y T DV+ G +E P+ GG
Sbjct: 578 IPSYNKMRQFCGLKSANTFDDFADMILDRNLRAGLARNYNTTNDVDFYVGSMLEDPVIGG 637
Query: 439 YRSXTAAXIINKQLSLTMKADR 504
T + I +Q DR
Sbjct: 638 LVGTTLSCAIGEQFKRARDGDR 659
>Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical
protein C53A5.3 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 193 GIRNNAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTW-KDMLKF 336
G+ N + RP+ + FE+ + F Y+ ++K + +K++ K MLKF
Sbjct: 50 GLYRNLEIFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKF 98
>Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical
protein F34D10.6 protein.
Length = 539
Score = 28.7 bits (61), Expect = 2.9
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 65 VTDLSLHTDFLMRDKNLAKMTRGTYYQAGGDNDRAVDPAICDKGLGIMQKASDLT----A 232
V ++ H D + + L G + ++DR++ IC++ +G+++ T A
Sbjct: 143 VPNIPEHLDLIKKLSLLQSQVLGIWDAVAAEDDRSLKQLICERQMGLVRDRDGRTPLHHA 202
Query: 233 ADLRKNQLSKFHLTSTT*NCAMMSKLKHGKT 325
R+N+L ++ L + + K +HGKT
Sbjct: 203 YMKRRNELIEYLLYICPDSANI--KDRHGKT 231
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 336 EFQHVFPCFNFDIMAQFYVVDVRWNFES*FF 244
EF+HVF +FD++ + + + W F S FF
Sbjct: 241 EFEHVFSDLSFDVLFKRLLNFMCWRFPSQFF 271
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 336 EFQHVFPCFNFDIMAQFYVVDVRWNFES*FF 244
EF+HVF +FD++ + + + W F S FF
Sbjct: 241 EFEHVFSDLSFDVLFKRLLNFMCWRFPSQFF 271
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 336 EFQHVFPCFNFDIMAQFYVVDVRWNFES*FF 244
EF+HVF +FD++ + + + W F S FF
Sbjct: 241 EFEHVFSDLSFDVLFKRLLNFMCWRFPSQFF 271
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 307 IKTWKDMLKFIDMDR-IESLQEIYETPGD-VELLAGIWIERPMEG 435
+K W D++ F D+D + L +PGD +++L I+ E P G
Sbjct: 223 VKPWSDIVVFSDIDDFLLPLDPSTISPGDNLQILKNIFAEHPQAG 267
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -3
Query: 408 SCQEFHVTRGFVNFLQTFNSIHVNEFQHVFPCFNFDIMAQFYVVDVRWN 262
+C+ + +RGF +FL FN I F + + Y+ D RWN
Sbjct: 1135 ACKHYPSSRGFEDFLDVFNLIFTGVFAFEAVLKIVALNPKNYISD-RWN 1182
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -3
Query: 408 SCQEFHVTRGFVNFLQTFNSIHVNEFQHVFPCFNFDIMAQFYVVDVRWN 262
+C+ + +RGF +FL FN I F + + Y+ D RWN
Sbjct: 1135 ACKHYPSSRGFEDFLDVFNLIFTGVFAFEAVLKIVALNPKNYISD-RWN 1182
>AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical
protein T11F1.6 protein.
Length = 431
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 423 SFNPDSCQEFHVTRGFVNFLQTFNSIHVN 337
+ +PD C FH GF++ F +IH N
Sbjct: 300 NLHPDFCLTFHEMIGFLDAQVYFKNIHAN 328
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -3
Query: 408 SCQEFHVTRGFVNFLQTFNSIHVNEFQHVFPCFNFDIMAQFYVVDVRWN 262
+C+ + +RGF +FL FN I F + + Y+ D RWN
Sbjct: 1135 ACKHYPSSRGFEDFLDVFNLIFTGVFAFEAVLKIVALNPKNYISD-RWN 1182
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 188 HKWP-GLQLYHYLLQPDSKFLVSFLPSSYL 102
H W G+++ YLL P F + FLP++ L
Sbjct: 120 HTWSLGVEMQFYLLAPFIFFAIQFLPNTTL 149
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 188 HKWP-GLQLYHYLLQPDSKFLVSFLPSSYL 102
H W G+++ YLL P F + FLP++ L
Sbjct: 120 HTWSLGVEMQFYLLAPFIFFAIQFLPNTTL 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,840,637
Number of Sequences: 27780
Number of extensions: 270958
Number of successful extensions: 636
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -