Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0710.Seq
(538 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 0.86
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 1.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 1.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 1.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 1.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 2.6
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 23 2.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.6
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 8.0
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 24.2 bits (50), Expect = 0.86
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 362 APSILVGVGNGIVTFIG 312
AP ILVG G GI F G
Sbjct: 966 APMILVGPGTGIAPFRG 982
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Frame = +1
Query: 82 TYKLNRPCRILQSLATNMKAMGKRLPYLAKYEVAVNSSGTVQYTNLNMYEDNGYKINEIS 261
+YK R R + + K + ++ + S +Y+N N Y +N Y N
Sbjct: 49 SYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
Query: 262 TALVLML*TIATNLKT*PINVTIPL---PTPTRILGAXLPVQ 378
+ ++ PI V +P+ P R LG + +Q
Sbjct: 109 KLQYYNI----NYIEQIPIPVPVPIYCGNFPPRPLGPWISIQ 146
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Frame = +1
Query: 82 TYKLNRPCRILQSLATNMKAMGKRLPYLAKYEVAVNSSGTVQYTNLNMYEDNGYKINEIS 261
+YK R R + + K + ++ + S +Y+N N Y +N Y N
Sbjct: 49 SYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
Query: 262 TALVLML*TIATNLKT*PINVTIPL---PTPTRILGAXLPVQ 378
+ ++ PI V +P+ P R LG + +Q
Sbjct: 109 KLQYYNI----NYIEQIPIPVPVPIYCGNFPPRPLGPWISIQ 146
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Frame = +1
Query: 82 TYKLNRPCRILQSLATNMKAMGKRLPYLAKYEVAVNSSGTVQYTNLNMYEDNGYKINEIS 261
+YK R R + + K + ++ + S +Y+N N Y +N Y N
Sbjct: 49 SYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
Query: 262 TALVLML*TIATNLKT*PINVTIPL---PTPTRILGAXLPVQ 378
+ ++ PI V +P+ P R LG + +Q
Sbjct: 109 KLQYYNI----NYIEQIPIPVPVPIYCGNFPPRPLGPWISIQ 146
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.5
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 3/102 (2%)
Frame = +1
Query: 82 TYKLNRPCRILQSLATNMKAMGKRLPYLAKYEVAVNSSGTVQYTNLNMYEDNGYKINEIS 261
+YK R R + + K + ++ + S +Y+N N Y +N Y N
Sbjct: 49 SYKNEREYREYRETSRERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYK 108
Query: 262 TALVLML*TIATNLKT*PINVTIPL---PTPTRILGAXLPVQ 378
+ ++ PI V +P+ P R LG + +Q
Sbjct: 109 KLQYYNI----NYIEQIPIPVPVPIYCGNFPPRPLGPWISIQ 146
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.6 bits (46), Expect = 2.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 21 WSLRVENIPQHTSGSSVQP 77
W L E +P+ +S +SV+P
Sbjct: 76 WLLTEEKLPKTSSNASVEP 94
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 220 LSSCIVLYRNC*RLPHI*QGTVTFC 146
L + + L+ C P I QGT ++C
Sbjct: 12 LLAIVFLFDKCSGYPSIRQGTTSYC 36
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 4.6
Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
Frame = -2
Query: 105 ARSVQFICHQAAR---YCHLC 52
ARS QF+C A CH C
Sbjct: 730 ARSEQFLCRYEAHCFALCHCC 750
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 8.0
Identities = 9/42 (21%), Positives = 23/42 (54%)
Frame = +1
Query: 106 RILQSLATNMKAMGKRLPYLAKYEVAVNSSGTVQYTNLNMYE 231
R+ + ++MK++G+ + K+E A + + N+N ++
Sbjct: 194 RVCTQIGSSMKSVGEVMAIGRKFEEAFQKALRMVDENINGFD 235
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,562
Number of Sequences: 438
Number of extensions: 3696
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15213684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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