Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0710.Seq
(538 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to a... 60 9e-10
At4g34890.1 68417.m04948 xanthine dehydrogenase, putative simila... 58 4e-09
At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to ... 58 5e-09
At4g34900.1 68417.m04949 xanthine dehydrogenase, putative simila... 56 2e-08
At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to... 54 6e-08
At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to ... 54 8e-08
At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to ... 54 8e-08
At3g29250.1 68416.m03670 short-chain dehydrogenase/reductase (SD... 27 7.9
At1g65430.1 68414.m07423 zinc finger protein-related contains we... 27 7.9
At1g22880.1 68414.m02856 glycosyl hydrolase family 9 protein sim... 27 7.9
>At1g04580.1 68414.m00451 aldehyde oxidase, putative similar to
aldehyde oxidases from Arabidopsis thaliana: GI:3172023,
GI:3172025, GI:3172044; identical to cDNA putative
aldehyde oxidase (AO2) mRNA, partial cds GI:2792305
Length = 1337
Score = 60.1 bits (139), Expect = 9e-10
Identities = 34/92 (36%), Positives = 49/92 (53%)
Frame = +1
Query: 1 VHVRRVGGAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEV 180
V RRVGG +G K +S VA AC+L K+ RP RI + T+M G R P Y V
Sbjct: 793 VITRRVGGGFGGKAIKSMPVATACALAAKKMQRPVRIYVNRKTDMIMAGGRHPLKITYSV 852
Query: 181 AVNSSGTVQYTNLNMYEDNGYKINEISTALVL 276
S G + +LN++ D G +++ +LV+
Sbjct: 853 GFRSDGKLTALDLNLFIDAG---SDVDVSLVM 881
>At4g34890.1 68417.m04948 xanthine dehydrogenase, putative similar to
xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH
[SP|P47990]; contains Pfam profile PF02738 Aldehyde
oxidase and xanthine dehydrogenase, molybdopterin binding
domain
Length = 1361
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/81 (32%), Positives = 46/81 (56%)
Frame = +1
Query: 10 RRVGGAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEVAVN 189
+R+GG +G K +RS +A A S+ +Y LNRP +++ +M G R +L KY+V
Sbjct: 821 KRIGGGFGGKETRSAFIAAAASVPSYLLNRPVKLILDRDVDMMITGHRHSFLGKYKVGFT 880
Query: 190 SSGTVQYTNLNMYEDNGYKIN 252
+ G + +L +Y + G ++
Sbjct: 881 NEGKILALDLEIYNNGGNSLD 901
>At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to
GP:3172044:gnl:PID:d1029570:AB010080
Length = 1332
Score = 57.6 bits (133), Expect = 5e-09
Identities = 32/80 (40%), Positives = 40/80 (50%)
Frame = +1
Query: 1 VHVRRVGGAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEV 180
V RRVGG +G K +S VA AC+L YKL RP ++ + T+M G R P Y V
Sbjct: 791 VITRRVGGGFGGKAVKSMPVATACALGAYKLQRPVKMFLNRKTDMIMAGGRHPMKINYNV 850
Query: 181 AVNSSGTVQYTNLNMYEDNG 240
S G + L M D G
Sbjct: 851 GFRSDGKLTALELTMLIDAG 870
>At4g34900.1 68417.m04949 xanthine dehydrogenase, putative similar to
xanthine dehydrogenase from Gallus gallus, PIR:XOCHDH
[SP|P47990], from Calliphora vicina [SP|P08793]; contains
Pfam profile PF02738 Aldehyde oxidase and xanthine
dehydrogenase, molybdopterin binding domain
Length = 1364
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/77 (32%), Positives = 44/77 (57%)
Frame = +1
Query: 10 RRVGGAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEVAVN 189
+R+GG +G K +RS +A A S+ +Y LNRP +++ +M G R ++ KY+V
Sbjct: 824 KRLGGGFGGKETRSAFIAAAASVPSYLLNRPVKLILDRDVDMMITGHRHSFVGKYKVGFT 883
Query: 190 SSGTVQYTNLNMYEDNG 240
+ G + +L +Y + G
Sbjct: 884 NEGKILALDLEIYNNGG 900
>At3g43600.1 68416.m04639 aldehyde oxidase, putative identical to gi:
3172025; identical to cDNA putative aldehyde oxidase
(AO3) mRNA, partial cds GI:2792303
Length = 1321
Score = 54.0 bits (124), Expect = 6e-08
Identities = 31/80 (38%), Positives = 39/80 (48%)
Frame = +1
Query: 1 VHVRRVGGAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEV 180
V RRVGG +G K +S VA AC+L KL RP R + T+M G R P Y V
Sbjct: 780 VITRRVGGGFGGKSVKSMPVATACALAAKKLQRPVRTYVNRKTDMIMTGGRHPMKITYSV 839
Query: 181 AVNSSGTVQYTNLNMYEDNG 240
S+G + L + D G
Sbjct: 840 GFKSTGKITALELEILIDAG 859
>At5g20960.2 68418.m02492 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 53.6 bits (123), Expect = 8e-08
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +1
Query: 1 VHVRRVGGAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEV 180
V RRVGG +G K +S VA AC+L K+ RP R + T+M G R P Y V
Sbjct: 823 VITRRVGGGFGGKAVKSMPVAAACALAASKMQRPVRTYVNRKTDMITTGGRHPMKVTYSV 882
Query: 181 AVNSSGTVQYTNLNMYEDNG 240
S+G + ++ + D G
Sbjct: 883 GFKSNGKITALDVEVLLDAG 902
>At5g20960.1 68418.m02491 aldehyde oxidase 1 (AAO1) identical to
aldehyde oxidase AAO1 from Arabidopsis thaliana
[gi:3172023] isoform contains a GA-donor splice site at
intron 10
Length = 1368
Score = 53.6 bits (123), Expect = 8e-08
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +1
Query: 1 VHVRRVGGAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEV 180
V RRVGG +G K +S VA AC+L K+ RP R + T+M G R P Y V
Sbjct: 823 VITRRVGGGFGGKAVKSMPVAAACALAASKMQRPVRTYVNRKTDMITTGGRHPMKVTYSV 882
Query: 181 AVNSSGTVQYTNLNMYEDNG 240
S+G + ++ + D G
Sbjct: 883 GFKSNGKITALDVEVLLDAG 902
>At3g29250.1 68416.m03670 short-chain dehydrogenase/reductase (SDR)
family protein similar to
3-beta-hydroxysteroiddehydrogenase GI:15983819 from
[Digitalis lanata]; contains Pfam profile: PF00106 short
chain dehydrogenase
Length = 379
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/84 (17%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +1
Query: 22 GAYGLKISRSTQVAVACSLVTYKLNRPCRILQSLAT---NMKAMGKRLPYLAKYEVAVNS 192
G YG++++ VA + + ++L+ N+K + + ++A+ + + S
Sbjct: 295 GQYGIRVNGVAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLAS 354
Query: 193 SGTVQYTNLNMYEDNGYKINEIST 264
+V + N+ D G+ + ++ T
Sbjct: 355 DDSVYISGQNLVVDGGFSVVKLMT 378
>At1g65430.1 68414.m07423 zinc finger protein-related contains weak
similarity to zinc finger proteins and a Pfam:PF01485
IBR domain
Length = 567
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 297 KSKNLTYKCYNTVTDTHKNTWCXAPG 374
K K +Y + V D K WC APG
Sbjct: 196 KQKYTSYFVRSYVEDNRKTKWCPAPG 221
>At1g22880.1 68414.m02856 glycosyl hydrolase family 9 protein
similar to GB:AAB65156 and GB:AAA96135
Length = 484
Score = 27.1 bits (57), Expect = 7.9
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 31 GLKISRSTQVAVACSLVTYKLNRPCRILQSLATNMKAMGKRLPYLAKYEVAVNSSGTVQY 210
G ++ T A+A S + ++ P LAT K M + Y Y +++SS Y
Sbjct: 167 GSDVAAETAAALAASSMVFRKVDPKYSRLLLATAKKVMQFAIQYRGAYSNSLSSSVCPFY 226
Query: 211 TNLNMYED 234
+ + Y+D
Sbjct: 227 CSYSGYKD 234
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,428,482
Number of Sequences: 28952
Number of extensions: 231739
Number of successful extensions: 517
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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