Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0709.Seq
(409 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole... 51 8e-06
UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificit... 51 1e-05
UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2; ... 48 1e-04
UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificit... 42 0.004
UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase... 41 0.011
UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2; Saccharomyc... 40 0.015
UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleava... 40 0.019
UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity ... 39 0.034
UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|R... 36 0.24
UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein ECU10_... 36 0.24
UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Meta... 36 0.31
UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metaz... 36 0.31
UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity ... 35 0.55
UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2; Ascomycota|... 35 0.73
UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase... 34 0.96
UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1; ... 34 0.96
UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15; Pezizomyco... 34 0.96
UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,... 34 1.3
UniRef50_UPI000049831F Cluster: cleavage and polyadenylation spe... 34 1.3
UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 34 1.3
UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificit... 34 1.3
UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific f... 34 1.3
UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific f... 34 1.3
UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16; T... 34 1.3
UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29; Eu... 34 1.3
UniRef50_A5BWD3 Cluster: Putative uncharacterized protein; n=3; ... 33 1.7
UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106, w... 33 2.2
UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2; ... 33 2.9
UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular or... 33 2.9
UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FE... 32 5.1
UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty... 31 6.8
>UniRef50_Q4TC63 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7053, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 810
Score = 51.2 bits (117), Expect = 8e-06
Identities = 30/63 (47%), Positives = 34/63 (53%)
Frame = +1
Query: 190 VPAEESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLXEAD* 369
VPAEESDQL IRPLGAGQEVG KG+ ALP+IDL +
Sbjct: 1 VPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 60
Query: 370 VDL 378
+DL
Sbjct: 61 IDL 63
Score = 50.4 bits (115), Expect = 1e-05
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SCI+LEFKG+ IMLDCG HPGL G D+
Sbjct: 22 RSCIILEFKGRKIMLDCGIHPGLEGMDA 49
>UniRef50_Q9UKF6 Cluster: Cleavage and polyadenylation specificity
factor subunit 3; n=53; Eumetazoa|Rep: Cleavage and
polyadenylation specificity factor subunit 3 - Homo
sapiens (Human)
Length = 684
Score = 50.8 bits (116), Expect = 1e-05
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +1
Query: 190 VPAEESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLXEAD* 369
+PAEESDQL IRPLGAGQEVG KG+ ALP+IDL +
Sbjct: 4 IPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAE 63
Query: 370 VDL 378
+DL
Sbjct: 64 IDL 66
Score = 50.4 bits (115), Expect = 1e-05
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SCI+LEFKG+ IMLDCG HPGL G D+
Sbjct: 25 RSCIILEFKGRKIMLDCGIHPGLEGMDA 52
>UniRef50_Q95PY8 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 707
Score = 47.6 bits (108), Expect = 1e-04
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SC +LE+KGK +MLDCG HPGL G D+
Sbjct: 24 RSCHLLEYKGKRVMLDCGVHPGLHGVDA 51
Score = 37.5 bits (83), Expect = 0.10
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = +1
Query: 199 EESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLXEAD*VDL 378
+ SD L PLG+GQEVG KGK ALPF+D E + +DL
Sbjct: 6 DNSDSLCFTPLGSGQEVGRSCHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVEIENIDL 65
>UniRef50_Q4Q2K1 Cluster: Cleavage and polyadenylation specificity
factor, putative; n=7; Trypanosomatidae|Rep: Cleavage
and polyadenylation specificity factor, putative -
Leishmania major
Length = 756
Score = 42.3 bits (95), Expect = 0.004
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SC+++++KG+ +MLDCG HP G DS
Sbjct: 39 RSCVVVQYKGRGVMLDCGNHPAKSGLDS 66
>UniRef50_Q236M0 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Tetrahymena thermophila SB210|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Tetrahymena thermophila SB210
Length = 750
Score = 40.7 bits (91), Expect = 0.011
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SCI+LE+KGK IM DCG H G G S
Sbjct: 14 RSCIILEYKGKTIMFDCGLHMGKNGHAS 41
Score = 32.7 bits (71), Expect = 2.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 214 LTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLXEAD*VDL 378
+ I PLGAGQEVG KGK + + +LP+ D + D +D+
Sbjct: 1 MVIYPLGAGQEVGRSCIILEYKGKTIMFDCGLHMGKNGHASLPYFDNIKPDQIDI 55
>UniRef50_Q6BMW3 Cluster: Endoribonuclease YSH1; n=2;
Saccharomycetaceae|Rep: Endoribonuclease YSH1 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 815
Score = 40.3 bits (90), Expect = 0.015
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDSPTLHRPY 356
+SC ++E+K K IMLD G HPGL G S + Y
Sbjct: 27 RSCHIIEYKNKVIMLDAGVHPGLQGLSSLPFYDEY 61
>UniRef50_Q86A79 Cluster: Similar to Homo sapiens (Human). Cleavage
and polyadenylation specificity factor, 73 kDa subunit;
n=2; Dictyostelium discoideum|Rep: Similar to Homo
sapiens (Human). Cleavage and polyadenylation
specificity factor, 73 kDa subunit - Dictyostelium
discoideum (Slime mold)
Length = 774
Score = 39.9 bits (89), Expect = 0.019
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXG 326
+SC++L++KGK +M DCG HP G
Sbjct: 49 RSCVLLKYKGKKVMFDCGVHPAYSG 73
Score = 33.5 bits (73), Expect = 1.7
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +1
Query: 199 EESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLXEAD*VDL 378
E+ D L I P+G+G EVG KGK + +LPF D E+D D+
Sbjct: 31 EDDDILEITPIGSGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPFFDSIESDIPDI 90
>UniRef50_Q5CPX2 Cluster: Cleavage and polyadenylation specifity
factor protein, CPSF metallobeta-lactamase; n=2;
Cryptosporidium|Rep: Cleavage and polyadenylation
specifity factor protein, CPSF metallobeta-lactamase -
Cryptosporidium parvum Iowa II
Length = 780
Score = 39.1 bits (87), Expect = 0.034
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SC+++ FKG+ +M DCG HP G S
Sbjct: 37 RSCVVVSFKGRSVMFDCGIHPAFSGIGS 64
>UniRef50_A4S2M5 Cluster: Predicted protein; n=4; Viridiplantae|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 767
Score = 36.3 bits (80), Expect = 0.24
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SC++ +K K +M DCG HPG G S
Sbjct: 25 RSCVIARYKQKTLMFDCGIHPGYAGLAS 52
>UniRef50_Q8SUE4 Cluster: Putative uncharacterized protein
ECU10_0900; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU10_0900 - Encephalitozoon
cuniculi
Length = 730
Score = 36.3 bits (80), Expect = 0.24
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SC+++E G+ IMLDCG HP G S
Sbjct: 107 RSCVIVECGGRTIMLDCGVHPAYTGMAS 134
>UniRef50_Q06224 Cluster: Endoribonuclease YSH1; n=10; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 779
Score = 35.9 bits (79), Expect = 0.31
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
+SC +L++KGK +MLD G HP G S
Sbjct: 22 RSCHILQYKGKTVMLDAGIHPAYQGLAS 49
>UniRef50_Q4PEJ3 Cluster: Endoribonuclease YSH1; n=6; Fungi/Metazoa
group|Rep: Endoribonuclease YSH1 - Ustilago maydis (Smut
fungus)
Length = 880
Score = 35.9 bits (79), Expect = 0.31
Identities = 25/66 (37%), Positives = 28/66 (42%)
Frame = +1
Query: 178 GTDPVPAEESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLX 357
G + A DQLTI LGAGQEVG +GK ALPFID
Sbjct: 12 GGAALQASADDQLTIEMLGAGQEVGRSCCVLKYRGKTIVCDTGVHPAFTGIAALPFIDEL 71
Query: 358 EAD*VD 375
+ VD
Sbjct: 72 DWSTVD 77
>UniRef50_A5KD85 Cluster: Cleavage and polyadenylation specifity
factor protein, putative; n=2; Plasmodium vivax|Rep:
Cleavage and polyadenylation specifity factor protein,
putative - Plasmodium vivax
Length = 858
Score = 35.1 bits (77), Expect = 0.55
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDSPTLHRPY 356
+SC+++E + IMLDCG HP G ++ Y
Sbjct: 17 RSCVIIESANRSIMLDCGIHPAFMGIGCLPIYDAY 51
>UniRef50_O13794 Cluster: Endoribonuclease ysh1; n=2;
Ascomycota|Rep: Endoribonuclease ysh1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 775
Score = 34.7 bits (76), Expect = 0.73
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXG 326
+SC ++++KGK +MLD G HP G
Sbjct: 50 RSCHVIQYKGKTVMLDAGVHPAYTG 74
>UniRef50_A2FCF8 Cluster: RNA-metabolising metallo-beta-lactamase
family protein; n=1; Trichomonas vaginalis G3|Rep:
RNA-metabolising metallo-beta-lactamase family protein -
Trichomonas vaginalis G3
Length = 679
Score = 34.3 bits (75), Expect = 0.96
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHP 314
+SCI+L++ K +MLDCG HP
Sbjct: 24 RSCIILKYHRKRVMLDCGIHP 44
>UniRef50_A6QXP5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 925
Score = 34.3 bits (75), Expect = 0.96
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXG 326
+SC ++++KGK +MLD G HP G
Sbjct: 38 RSCHIIQYKGKTVMLDAGMHPAKDG 62
>UniRef50_Q5BEP0 Cluster: Endoribonuclease ysh1; n=15;
Pezizomycotina|Rep: Endoribonuclease ysh1 - Emericella
nidulans (Aspergillus nidulans)
Length = 884
Score = 34.3 bits (75), Expect = 0.96
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXG 326
+SC ++++KGK +MLD G HP G
Sbjct: 37 RSCHIIQYKGKTVMLDAGMHPAKEG 61
Score = 32.7 bits (71), Expect = 2.9
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +1
Query: 184 DPVPAEESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLXEA 363
D P + SD+L LG G EVG KGK ++ALPF D +
Sbjct: 14 DDEPVDPSDELAFYCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAKEGFSALPFFDEFDL 73
Query: 364 D*VDL 378
VD+
Sbjct: 74 STVDI 78
>UniRef50_UPI0001555813 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein, partial - Ornithorhynchus anatinus
Length = 513
Score = 33.9 bits (74), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SCI++ GK +MLDCG H G
Sbjct: 17 RSCILVSIAGKNVMLDCGMHMG 38
>UniRef50_UPI000049831F Cluster: cleavage and polyadenylation
specificity factor 73 kDa subunit, putative; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: cleavage and
polyadenylation specificity factor 73 kDa subunit,
putative - Entamoeba histolytica HM-1:IMSS
Length = 755
Score = 33.9 bits (74), Expect = 1.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHP 314
+SC +L++ G IMLDCG HP
Sbjct: 34 RSCFILKYMGHNIMLDCGVHP 54
>UniRef50_Q4S6C2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 698
Score = 33.9 bits (74), Expect = 1.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SCI++ GK IMLDCG H G
Sbjct: 17 RSCILVSIGGKNIMLDCGMHMG 38
>UniRef50_Q7RRQ3 Cluster: Cleavage and polyadenylation specificity
factor, 73 kDa subunit; n=7; Plasmodium|Rep: Cleavage
and polyadenylation specificity factor, 73 kDa subunit -
Plasmodium yoelii yoelii
Length = 942
Score = 33.9 bits (74), Expect = 1.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDSPTLHRPY 356
+SC+++E + IMLDCG HP G ++ Y
Sbjct: 17 RSCVIIESEKTSIMLDCGIHPAFMGIGCLPIYDAY 51
>UniRef50_Q5TA51 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=2; Homo sapiens|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 308
Score = 33.9 bits (74), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SCI++ GK +MLDCG H G
Sbjct: 36 RSCILVSIAGKNVMLDCGMHMG 57
>UniRef50_Q5TA44 Cluster: Cleavage and polyadenylation specific
factor 3-like; n=4; Eutheria|Rep: Cleavage and
polyadenylation specific factor 3-like - Homo sapiens
(Human)
Length = 401
Score = 33.9 bits (74), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SCI++ GK +MLDCG H G
Sbjct: 29 RSCILVSIAGKNVMLDCGMHMG 50
>UniRef50_A6NEN7 Cluster: Uncharacterized protein CPSF3L; n=16;
Theria|Rep: Uncharacterized protein CPSF3L - Homo
sapiens (Human)
Length = 277
Score = 33.9 bits (74), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SCI++ GK +MLDCG H G
Sbjct: 17 RSCILVSIAGKNVMLDCGMHMG 38
>UniRef50_Q5TA45 Cluster: Integrator complex subunit 11; n=29;
Eukaryota|Rep: Integrator complex subunit 11 - Homo
sapiens (Human)
Length = 600
Score = 33.9 bits (74), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SCI++ GK +MLDCG H G
Sbjct: 17 RSCILVSIAGKNVMLDCGMHMG 38
>UniRef50_A5BWD3 Cluster: Putative uncharacterized protein; n=3;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 986
Score = 33.5 bits (73), Expect = 1.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXG 326
+SC+ +KGK I+ DCG PG G
Sbjct: 534 RSCVYTSYKGKTILFDCGVLPGYTG 558
>UniRef50_A0BGT5 Cluster: Chromosome undetermined scaffold_106,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_106,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 690
Score = 33.1 bits (72), Expect = 2.2
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXH 311
+SCI+L+F+ K IM DCG H
Sbjct: 21 RSCILLQFQEKQIMFDCGIH 40
>UniRef50_Q9U3K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 608
Score = 32.7 bits (71), Expect = 2.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SCI++ GK IM+DCG H G
Sbjct: 21 RSCILITIGGKNIMVDCGMHMG 42
>UniRef50_Q5KCZ0 Cluster: Endoribonuclease YSH1; n=2; cellular
organisms|Rep: Endoribonuclease YSH1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 773
Score = 32.7 bits (71), Expect = 2.9
Identities = 23/61 (37%), Positives = 27/61 (44%)
Frame = +1
Query: 193 PAEESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLXEAD*V 372
P E++ LTI LGAGQEVG +GK ALPFID + V
Sbjct: 22 PDEDAPSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGLHPAQPGIGALPFIDELDWSTV 81
Query: 373 D 375
D
Sbjct: 82 D 82
>UniRef50_Q8GUU3 Cluster: FEG protein; n=8; Magnoliophyta|Rep: FEG
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 613
Score = 31.9 bits (69), Expect = 5.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
+SC+++ GK IM DCG H G
Sbjct: 16 KSCVVVTINGKKIMFDCGMHMG 37
>UniRef50_Q4UBM2 Cluster: Cleavage and polyadenylation specificty
factor, subunit, putative; n=4; Piroplasmida|Rep:
Cleavage and polyadenylation specificty factor, subunit,
putative - Theileria annulata
Length = 1282
Score = 31.5 bits (68), Expect = 6.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXG 326
+SC+ +E +M DCG HP L G
Sbjct: 18 RSCVYVERDNSCLMFDCGLHPALSG 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,859,985
Number of Sequences: 1657284
Number of extensions: 5650944
Number of successful extensions: 10309
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 10140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10303
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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