Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0709.Seq
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.2  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   1.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   2.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   2.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.1  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 60  LIVTYNITPQXFILL*LSYWL 122
           L++ YNI  Q   +  +SYWL
Sbjct: 41  LLILYNIILQVLFVSFVSYWL 61


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 60  LIVTYNITPQXFILL*LSYWL 122
           L++ YNI  Q   +  +SYWL
Sbjct: 59  LLILYNIILQVLFVSFVSYWL 79


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 269 QHDA*LPTSWPAPSG 225
           QHD   P+S PAP G
Sbjct: 268 QHDLGSPSSGPAPPG 282


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 213 LIAFLRRHWISAFSW 169
           LIA L  HW+S +SW
Sbjct: 145 LIA-LGEHWLSRYSW 158


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 213 LIAFLRRHWISAFSW 169
           LIA L  HW+S +SW
Sbjct: 145 LIA-LGEHWLSRYSW 158


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 228 WSYCQLIAFLRRHWIS 181
           W+  + I+FLR  W+S
Sbjct: 294 WTSKEKISFLRGFWLS 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,315
Number of Sequences: 336
Number of extensions: 1385
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)