Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0709.Seq
         (409 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119128-1|AAM50988.1|  684|Drosophila melanogaster RE31408p pro...    53   1e-07
AE014297-2556|AAF55578.2|  684|Drosophila melanogaster CG7698-PA...    53   1e-07
AY061097-1|AAL28645.1|  597|Drosophila melanogaster LD08814p pro...    34   0.063
AE014297-4430|AAF56931.1|  597|Drosophila melanogaster CG1972-PA...    34   0.063
AY061140-1|AAL28688.1|  325|Drosophila melanogaster LD11958p pro...    28   4.1  
AE014297-690|AAF54181.1|  325|Drosophila melanogaster CG2723-PA ...    28   4.1  
AY058574-1|AAL13803.1|  654|Drosophila melanogaster LD26912p pro...    27   7.2  
AE014296-2635|AAF49538.2|  654|Drosophila melanogaster CG5222-PA...    27   7.2  

>AY119128-1|AAM50988.1|  684|Drosophila melanogaster RE31408p
           protein.
          Length = 684

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = +3

Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
           +SCIMLEFKGK IMLDCG HPGL G D+
Sbjct: 31  RSCIMLEFKGKKIMLDCGIHPGLSGMDA 58



 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 30/67 (44%), Positives = 35/67 (52%)
 Frame = +1

Query: 178 GTDPVPAEESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLX 357
           G   +P EESD L I+PLGAGQEVG        KGK                ALP++DL 
Sbjct: 6   GDARMPDEESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLI 65

Query: 358 EAD*VDL 378
           EAD +DL
Sbjct: 66  EADEIDL 72


>AE014297-2556|AAF55578.2|  684|Drosophila melanogaster CG7698-PA
           protein.
          Length = 684

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = +3

Query: 252 QSCIMLEFKGKXIMLDCGXHPGLXGXDS 335
           +SCIMLEFKGK IMLDCG HPGL G D+
Sbjct: 31  RSCIMLEFKGKKIMLDCGIHPGLSGMDA 58



 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 30/67 (44%), Positives = 35/67 (52%)
 Frame = +1

Query: 178 GTDPVPAEESDQLTIRPLGAGQEVGSHASCWSSKGKX*CWTVAXILDXLXWTALPFIDLX 357
           G   +P EESD L I+PLGAGQEVG        KGK                ALP++DL 
Sbjct: 6   GDARMPDEESDLLQIKPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLI 65

Query: 358 EAD*VDL 378
           EAD +DL
Sbjct: 66  EADEIDL 72


>AY061097-1|AAL28645.1|  597|Drosophila melanogaster LD08814p
           protein.
          Length = 597

 Score = 34.3 bits (75), Expect = 0.063
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
           +SC++L   GK IMLDCG H G
Sbjct: 17  RSCLLLSMGGKNIMLDCGMHMG 38


>AE014297-4430|AAF56931.1|  597|Drosophila melanogaster CG1972-PA
           protein.
          Length = 597

 Score = 34.3 bits (75), Expect = 0.063
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 252 QSCIMLEFKGKXIMLDCGXHPG 317
           +SC++L   GK IMLDCG H G
Sbjct: 17  RSCLLLSMGGKNIMLDCGMHMG 38


>AY061140-1|AAL28688.1|  325|Drosophila melanogaster LD11958p
           protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 160 TTNPRKGTDPVPAEESDQLTIRPLGAGQEVGSHASCW 270
           T NPR  T P+P       T RP+GAG   GS    W
Sbjct: 72  TANPRPST-PLPTRMRTTTTRRPIGAGAS-GSGGMGW 106


>AE014297-690|AAF54181.1|  325|Drosophila melanogaster CG2723-PA
           protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +1

Query: 160 TTNPRKGTDPVPAEESDQLTIRPLGAGQEVGSHASCW 270
           T NPR  T P+P       T RP+GAG   GS    W
Sbjct: 72  TANPRPST-PLPTRMRTTTTRRPIGAGAS-GSGGMGW 106


>AY058574-1|AAL13803.1|  654|Drosophila melanogaster LD26912p
           protein.
          Length = 654

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 258 CIMLEFKGKXIMLDCG 305
           C ++ FKG  IMLDCG
Sbjct: 14  CYIITFKGLRIMLDCG 29


>AE014296-2635|AAF49538.2|  654|Drosophila melanogaster CG5222-PA
           protein.
          Length = 654

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 258 CIMLEFKGKXIMLDCG 305
           C ++ FKG  IMLDCG
Sbjct: 14  CYIITFKGLRIMLDCG 29


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,794,307
Number of Sequences: 53049
Number of extensions: 255006
Number of successful extensions: 449
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)