Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0708.Seq
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   0.89 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.7  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   3.6  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.3  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 452 LQHIPLSPAGVIAEEARPDALPNSCA 529
           L+  P +P G   +   PDAL  SCA
Sbjct: 50  LEKKPCTPDGEELKRVLPDALKTSCA 75


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 464 PLSPAGVIAEEARPDALPNSCA 529
           P  P GV  +   P+AL  +CA
Sbjct: 52  PCPPQGVDLKRVLPEALQTNCA 73


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 470 SPAGVIAEEARPDALPNSCA 529
           +P+G   ++  PDAL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 452 LQHIPLSPAGVIAEEARPDALPNSCA 529
           L+  P SP G   ++  PDAL  +C+
Sbjct: 61  LEKGPCSPEGRELKKILPDALVTNCS 86


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 470 SPAGVIAEEARPDALPNSCA 529
           +P G   ++  PDAL N CA
Sbjct: 53  TPEGEELKKDIPDALQNECA 72


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/44 (22%), Positives = 17/44 (38%)
 Frame = +1

Query: 385  IHWPVVLQRRDWENPGVTQLNRLAAHPPFASWRNSRRGPPRCPS 516
            +HW    +  DW      +  +    P  +SW+   +   R PS
Sbjct: 1135 LHWNKERKICDWPKSAKCEEKKPGHKPSTSSWQKPTKPSYRPPS 1178


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +1

Query: 451 LAAHPPFASWRNSRRGPPRCPSQQLRSLNG 540
           L+ HP   S  ++ R     P  Q+R++ G
Sbjct: 256 LSLHPAETSMNDANRNDCAKPLTQIRNIRG 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,719
Number of Sequences: 336
Number of extensions: 2487
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)