Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0708.Seq
         (617 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    29   5.0  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    29   5.0  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    29   5.0  
BT029568-1|ABL75627.1|  171|Drosophila melanogaster IP16874p pro...    29   6.6  
AY129451-1|AAM76193.1|  787|Drosophila melanogaster RE01517p pro...    29   6.6  
AE014298-1891|AAF48260.1|  787|Drosophila melanogaster CG10617-P...    29   6.6  
BT024297-1|ABC86359.1|  452|Drosophila melanogaster IP12438p pro...    28   8.8  
AE014298-816|AAF46099.1|  494|Drosophila melanogaster CG4020-PA ...    28   8.8  
AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-P...    28   8.8  

>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 416 TGKTLALPNLIALQHIPLSPAGVIAEEARPDALPNSCA 529
           TG   A  +L++  H PL   GVI + + P  LP+S A
Sbjct: 26  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 416 TGKTLALPNLIALQHIPLSPAGVIAEEARPDALPNSCA 529
           TG   A  +L++  H PL   GVI + + P  LP+S A
Sbjct: 63  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 416 TGKTLALPNLIALQHIPLSPAGVIAEEARPDALPNSCA 529
           TG   A  +L++  H PL   GVI + + P  LP+S A
Sbjct: 41  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78


>BT029568-1|ABL75627.1|  171|Drosophila melanogaster IP16874p
           protein.
          Length = 171

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -1

Query: 533 RLRNCWEGHRGGPLRLLRQLAKGGCAA 453
           R   C  GHRGGP    R L +  CAA
Sbjct: 133 RCHGCGGGHRGGPEGFARPLLRLRCAA 159


>AY129451-1|AAM76193.1|  787|Drosophila melanogaster RE01517p
           protein.
          Length = 787

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 413 VTGKTLALPNLIALQHIPLSPAGVIAEEARPDALPNSCAA 532
           +TG + AL    A+ H+P S   +     RP   PNS AA
Sbjct: 111 ITGSSSALQATTAMWHLPRSGIKIPPPPDRPAPSPNSAAA 150


>AE014298-1891|AAF48260.1|  787|Drosophila melanogaster CG10617-PA
           protein.
          Length = 787

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 413 VTGKTLALPNLIALQHIPLSPAGVIAEEARPDALPNSCAA 532
           +TG + AL    A+ H+P S   +     RP   PNS AA
Sbjct: 111 ITGSSSALQATTAMWHLPRSGIKIPPPPDRPAPSPNSAAA 150


>BT024297-1|ABC86359.1|  452|Drosophila melanogaster IP12438p
           protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 376 RITIHWP----VVLQRRDWENPGVTQLNRLAAHPPFASWRNSRRGPPRCPSQQLRSLNGE 543
           ++ + WP     V     + NPGV ++     +PP A WR + +      ++ L   N +
Sbjct: 93  KLALEWPKLKAFVHVSTTYSNPGVLEVEE-RVYPPLADWRTTIKLAETYDAEILDIFNLK 151

Query: 544 WANCKP 561
           + N +P
Sbjct: 152 YGNFQP 157


>AE014298-816|AAF46099.1|  494|Drosophila melanogaster CG4020-PA
           protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 376 RITIHWP----VVLQRRDWENPGVTQLNRLAAHPPFASWRNSRRGPPRCPSQQLRSLNGE 543
           ++ + WP     V     + NPGV ++     +PP A WR + +      ++ L   N +
Sbjct: 135 KLALEWPKLKAFVHVSTTYSNPGVLEVEE-RVYPPLADWRTTIKLAETYDAEILDIFNLK 193

Query: 544 WANCKP 561
           + N +P
Sbjct: 194 YGNFQP 199


>AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-PA
           protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 31  VIQIHQN*RLRTRGPPSIGFDL 96
           ++QI  N +  TR PPSIG DL
Sbjct: 353 IVQIRDNIQAETRRPPSIGGDL 374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,754,952
Number of Sequences: 53049
Number of extensions: 513143
Number of successful extensions: 1249
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)