Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0707.Seq
         (479 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    24   2.4  
AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding pr...    23   7.2  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   7.2  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    23   7.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   7.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    22   9.5  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 415 PEFPAVDRSLYYKESLD 465
           P FP  DR  YY++++D
Sbjct: 60  PRFPPYDRMGYYQQTMD 76


>AY330182-1|AAQ16288.1|  181|Anopheles gambiae odorant-binding
           protein AgamOBP56 protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 204 LASLIKQLFSRALYKGAKIPTAILACHSKLAHFHY 100
           LA  I+     A  K AK+P     C S+ ++F Y
Sbjct: 103 LAGHIETCVKEAKEKAAKMPREAGQCSSETSNFGY 137


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 147 EFWRPYTGRGKT 182
           E+ RPY GRG+T
Sbjct: 225 EYDRPYRGRGRT 236


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 204 LASLIKQLFSRALYKGAKIPTAILACHSKLAHFHY 100
           LA  I+     A  K AK+P     C S+ ++F Y
Sbjct: 157 LAGHIETCVKEAKEKAAKMPREAGQCSSETSNFGY 191


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 52  ILIQDVLAYNKRTXXXXXXXRELAMAGQNGGG 147
           ++IQ   +Y ++T       R   + G+NG G
Sbjct: 6   VIIQGFKSYREQTVVEPFDKRHNVVVGRNGSG 37


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 126 GRPKWRWEFWRP 161
           GRP W+W   RP
Sbjct: 735 GRPGWKWMSVRP 746


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,735
Number of Sequences: 2352
Number of extensions: 10111
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)