Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0703.Seq
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 4e-23
SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16) 74 9e-14
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 73 2e-13
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 73 2e-13
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 73 2e-13
SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23) 69 3e-12
SB_38411| Best HMM Match : PHR (HMM E-Value=1.8e-28) 68 6e-12
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 56 1e-08
SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 49 2e-06
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 48 4e-06
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 46 2e-05
SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 43 1e-04
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 41 6e-04
SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 41 8e-04
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16) 40 0.002
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 36 0.017
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 36 0.029
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 34 0.067
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 34 0.088
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23) 33 0.15
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.27
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.62
SB_30686| Best HMM Match : BTB (HMM E-Value=0.52) 30 1.4
SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 104 bits (250), Expect = 4e-23
Identities = 48/96 (50%), Positives = 66/96 (68%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F AMF GG+A E+E+PDVEPSAF+ALL+++Y DE+Q+ +TV++TLY AKKY +P L
Sbjct: 1638 FDAMFNGGIATQSDEVELPDVEPSAFMALLRFLYTDEVQIGPETVMTTLYTAKKYAIPTL 1697
Query: 436 AKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRC 543
KACV++L+ LS LF+EP+L C
Sbjct: 1698 EKACVDFLKKNLAPDNAFMLLSQARLFDEPQLAALC 1733
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = +2
Query: 104 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASS 253
NWQA K V +R + ++NN+++SD+ F+VG + IPAHK+VL+ S+
Sbjct: 1587 NWQAEKTKVGDRISFLYNNEILSDVYFLVGKGPQRRRIPAHKFVLSIGSA 1636
>SB_56853| Best HMM Match : BTB (HMM E-Value=1.1e-16)
Length = 605
Score = 73.7 bits (173), Expect = 9e-14
Identities = 30/97 (30%), Positives = 54/97 (55%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F+AMFYG ++ ++E+PD + + L+Y+YC+ ++ ++ + LY++KKY+VP L
Sbjct: 61 FFAMFYGQMSTSISKVELPDCDSVGLIEFLRYLYCNRVKFTMESAIQALYLSKKYLVPSL 120
Query: 436 AKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRCW 546
AK CV Y+ L E +++ RC+
Sbjct: 121 AKHCVTYIRDNVTPQIVFDVLPYALKLAEKDILDRCF 157
Score = 50.4 bits (115), Expect = 9e-07
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +2
Query: 104 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI--IPAHKYVLATASSASMLCF 271
+WQ TK ++ R A FN+ LMSD+ F+V P + IPAHKY+L +S F
Sbjct: 8 DWQLTKTSLNSRVAHTFNSPLMSDVAFVVEDPAKQDVVSIPAHKYILGVSSPVFFAMF 65
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 72.5 bits (170), Expect = 2e-13
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F AMF+G LAE + +PD F LL+Y+YCD++ VL LY++KKYI+ HL
Sbjct: 57 FEAMFFGNLAESGPTVRLPDCTVDGFQELLRYLYCDQVVFTGKNVLDVLYLSKKYIISHL 116
Query: 436 AKACVNYLE 462
+ C +Y+E
Sbjct: 117 IEKCWDYIE 125
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI-IPAHKYVLATAS 250
+WQ K +++ER M++N L SDI F++ T++ PAHK+VL+ +S
Sbjct: 5 SWQTEKTSIKERVHYMYSNSLFSDIEFLITKADGTEVRFPAHKFVLSVSS 54
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
FYAMFYG +AE K EI V D + +F+ LL+Y Y DE + + VL LY+AKKYI+P L
Sbjct: 2790 FYAMFYGSMAEQKAEITVADSDADSFMELLRYAYFDEATINEENVLGVLYLAKKYILPFL 2849
Query: 436 A 438
A
Sbjct: 2850 A 2850
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +2
Query: 104 NWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 250
NWQ + +RER+ +FNN+L+SD++F VG IP HK +LA +S
Sbjct: 2739 NWQTKRRCIRERSEFLFNNKLLSDVSFRVGKEQGKYFIPGHKLILAISS 2787
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 72.5 bits (170), Expect = 2e-13
Identities = 31/97 (31%), Positives = 53/97 (54%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F AMF+G +AE +++ +PD A +L+Y Y DE++L V+S +Y+A+KYI+P L
Sbjct: 475 FEAMFHGAMAESSRKVSLPDCTAEALSEMLRYAYFDEVELTGSNVMSVMYLAEKYILPGL 534
Query: 436 AKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRCW 546
+ C +L+ + + L ++ L CW
Sbjct: 535 NEKCTQFLQENLEAKDVLFVLPEAMEIQDENLQRHCW 571
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI-IPAHKYVLATAS 250
WQ T++ER M+ N ++SD+ F+V KI IPAH+YVLA +S
Sbjct: 424 WQPAFKTIKERGKHMWKNPVLSDVEFLVCTSAGVKISIPAHRYVLAVSS 472
>SB_44086| Best HMM Match : BTB (HMM E-Value=1.8e-23)
Length = 417
Score = 68.5 bits (160), Expect = 3e-12
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F AMF+G +AE +EI +PD A +L+Y Y DE++L ++ +Y+A+KY P L
Sbjct: 57 FEAMFHGAMAESSREISLPDCYAEALSEMLRYAYYDEVKLTGSNAMAVMYLAEKYNFPGL 116
Query: 436 AKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRCW 546
+ C +YL+ + L ++ L CW
Sbjct: 117 KEKCSHYLQENLEPKDVLFVLPEAMKIQDENLQSHCW 153
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKI-IPAHKYVLATAS 250
WQ T++ER M+ N ++SD+ F+V KI IPAH+YVL+ +S
Sbjct: 6 WQPAFKTIKERGKHMWKNPVLSDVEFVVCTSAGEKISIPAHRYVLSVSS 54
>SB_38411| Best HMM Match : PHR (HMM E-Value=1.8e-28)
Length = 436
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/97 (34%), Positives = 49/97 (50%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F+AMF+G +A+ +EI V D E F LL+Y+Y D+ L D L LY+ KKY++ L
Sbjct: 61 FFAMFFGRMADDTKEIPVVDTEEECFTELLRYVYTDKCLLTLDNALGVLYLGKKYLLSVL 120
Query: 436 AKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRCW 546
C ++E + + L E L +CW
Sbjct: 121 VNKCAAFVEKHLNPDNALTVLCHSRYLGEKCLEEKCW 157
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +2
Query: 107 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSASMLCF 271
WQ TVRERN MFNN+L+SD+ F+VG+ IPAH+YVLA +S F
Sbjct: 13 WQLKVTTVRERNEFMFNNELLSDVHFLVGS--KKARIPAHRYVLAISSPVFFAMF 65
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/97 (34%), Positives = 48/97 (49%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F AMF+G LAE I +PD L +L++IY +EI+ + + LY+AKKYI+P L
Sbjct: 55 FEAMFFGKLAETGFTIALPDCSAEGMLEMLRFIYTEEIRFTINIAVEVLYLAKKYILPCL 114
Query: 436 AKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRCW 546
+ C Y + + L + EL CW
Sbjct: 115 EERCHEYFNEEMGPDDVLAVLPHAVRQADQELQIICW 151
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 107 WQATKPTVRERNAAMFNNQLMSDITF-IVGAPGHTKIIPAHKYVLATAS 250
WQ T++ER A M+NN+ SD+ F ++ A G IPAHKYVLAT+S
Sbjct: 4 WQTNLKTLKERGAHMYNNRTFSDVEFSVMNADGEKVSIPAHKYVLATSS 52
>SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 56.4 bits (130), Expect = 1e-08
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 FYAMFYGGLAE--CKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVP 429
F + F+G +AE C+ VE L L+Y+Y DE+QL + V+ L++AK YIVP
Sbjct: 54 FESQFHGPMAEKDCRTINYNGTVE--GLLEFLRYVYYDEVQLNQNVVMEVLHLAKFYIVP 111
Query: 430 HLAKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRCW 546
L C ++LE L +EE +L CW
Sbjct: 112 SLVSMCSHFLEENLGPKDVFIVLPEAIKYEEVKLQGICW 150
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +2
Query: 104 NWQATKPTVRERNAAMFNNQLMSDITF-IVGAPGHTKIIPAHKYVLATAS 250
+WQ ++ T+RER MFNN L SDI F +V + G IPAHK++LA S
Sbjct: 2 DWQTSRKTIRERTQYMFNNALHSDIEFAVVKSNGELDKIPAHKFILAIGS 51
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F AMF+G LAE + I +PD L +L+Y+Y DE+ + + LY+AKKYI+P L
Sbjct: 24 FEAMFFGKLAETSRNITLPDCFYEGVLEMLRYLYRDEV-----IITNVLYLAKKYILPGL 78
Query: 436 AKACVNY 456
+ C Y
Sbjct: 79 EELCYEY 85
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 188 VGAPGHTKIIPAHKYVLATAS 250
+ A G IPAHKYVLAT+S
Sbjct: 1 MNADGEKVSIPAHKYVLATSS 21
>SB_13923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = +1
Query: 301 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLET 465
IE+ + EP+AFL LL+Y+Y DE+QL + +A+KY++PHLA C ++L T
Sbjct: 117 IEISECEPAAFLELLRYLYYDEVQL-TTLQHGGMDLARKYLIPHLADICTDFLVT 170
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +2
Query: 98 DPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 250
D WQ + ++RERN MFNN+L SD+ F+VG + IPAHKY+++ +S
Sbjct: 31 DDQWQTSMCSLRERNKHMFNNELFSDVRFLVGRSA-KQSIPAHKYIMSISS 80
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF G +AE Q + + D++P+A AL+ Y Y EI++ D V + L VA +
Sbjct: 59 FSAMFTGDMAETSQNTVHLTDMDPAAVQALISYSYTSEIEIRVDNVENLLSVACILQIDE 118
Query: 433 LAKACVNYLETKXHSIKCM 489
+ AC ++ + H C+
Sbjct: 119 VKNACSEFMRHQLHPSNCL 137
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 KDYTSTQICVSNCKFSFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEAD 384
+ Y + +++C FYAMF G LAE KQ+ I + D+ P L+++ Y +++ +
Sbjct: 21 QSYAGHRAVLASCSAYFYAMFNGELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVE 80
Query: 385 TVLSTLYVAKKYIVPHLAKACVNYLETKXHSIKCM 489
V + L A + C +LE++ C+
Sbjct: 81 NVQNLLATASLLQFHEVKDLCCQFLESQLDPSNCL 115
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEI-EVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F+AMF G + E Q++ + V P + ++L +IY EI L+ D V L A +V
Sbjct: 59 FFAMFNGNMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELILQGANLMLVQS 118
Query: 433 LAKACVNYLETKXHSIKCM 489
+ AC +LE++ + C+
Sbjct: 119 VKDACCRFLESRLNVSNCL 137
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF GGL E ++ + + DV+ A L+ + Y ++ + + V S +Y + + +
Sbjct: 72 FQAMFTGGLVESFEDSVTLRDVDSGAVELLVDFAYTGKLDITTENVQSIMYASSLFQLNA 131
Query: 433 LAKACVNYLETKXHSIKCM 489
+ KAC +LE + H C+
Sbjct: 132 IQKACSEFLERQLHPSNCL 150
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 47.6 bits (108), Expect = 7e-06
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +1
Query: 256 FYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF G L E K I + + A ALL Y+Y I++ D V L A + +P
Sbjct: 108 FRAMFTGNLLESGKNRILLKGIAGVALQALLDYVYTSSIEIFDDNVEEVLNAACAFQIPE 167
Query: 433 LAKACVNYLETKXHSIKCMPSLSXV*LFEEPEL 531
+ C +L+ + H C+ L+ F EL
Sbjct: 168 IINVCSEFLKEQLHPSNCLGILALADRFSCEEL 200
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 FYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF G E K ++ + D++P A++ Y Y +I++ AD + VA + V
Sbjct: 58 FRAMFGEGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIEINADNFGAVFAVANMWDVKF 117
Query: 433 LAKACVNYLETKXHSIKCM 489
+ AC NYL + C+
Sbjct: 118 VLTACENYLRVHLSASNCL 136
>SB_8385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEI-EVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F+AMF G L+E +Q + + +++ A L++++Y EI++ D V L A +
Sbjct: 66 FFAMFTGELSESRQTVVTLKEIDSLALELLIEFVYIAEIEVTEDNVQVLLPAANLLQLNE 125
Query: 433 LAKACVNYLETKXHSIKCMPSLSXV*LFEEPELM 534
+ AC ++L+ + H C+ + + P+L+
Sbjct: 126 VRDACCDFLKAQLHPSNCLGIRAFADMHSCPDLL 159
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +1
Query: 256 FYAMF---YGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIV 426
F AMF G + K ++ + D++P A++ Y Y +I++ AD + VA + V
Sbjct: 100 FRAMFGLREGFVESSKNDVVLHDLDPKGVNAVISYFYNSKIEINADNFEAVFAVANMWDV 159
Query: 427 PHLAKACVNYLETKXHSIKCM 489
+ AC NYL + C+
Sbjct: 160 KFVLTACENYLRVHLSASNCL 180
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 226 QICVSNCKFSFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTL 402
++ +++C F++MF + E QE I + + + + L+ ++Y +I + D + S L
Sbjct: 49 RVVLASCSAYFHSMFTNSMLESSQEVITIQGLSEKSVIQLINFMYTRKITITIDNIESLL 108
Query: 403 YVAKKYIVPHLAKACVNYLETKXHSIKCM 489
+ + + + AC +++ H C+
Sbjct: 109 TASAVFQLDPVVYACCEFMKRHLHVSNCL 137
>SB_30927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/109 (21%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Frame = +1
Query: 208 KDYTSTQICVSNCKFSFYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEAD 384
+++ +I ++ AMF G+ E ++I++ ++P+ LL ++Y + + +
Sbjct: 39 REFRGHRIVLAGASSYLRAMFTNGMLESGMRDIKLQGIDPAVMEILLDFVYTGIVDISVE 98
Query: 385 TVLSTLYVAKKYIVPHLAKACVNYLETKXHSIKCMPSLSXV*LFEEPEL 531
V + L A + L++AC ++L+T + C+ + L+ EL
Sbjct: 99 NVQALLSGATLLNLQTLSQACCSFLQTHLDASNCLGIRAFADLYSCTEL 147
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 40.7 bits (91), Expect = 8e-04
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 KDYTSTQICVSNCKFSFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEAD 384
K + +I VS F +F GGL E + + + ++ F ALL +IY I + +
Sbjct: 43 KQFPIHKIVVSASSPYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEE 102
Query: 385 TVLSTLYVAKKYIVPHLAKACVNYLETKXHSIKCM 489
V L AK + + K C ++L + C+
Sbjct: 103 NVQQLLPAAKMLQLDAVEKCCCDFLMRQLEHANCL 137
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 40.7 bits (91), Expect = 8e-04
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 214 YTSTQICVSNCKFSFYAMFYGGLAECKQ--EIEVPDVEPSAFLALLKYIYCDEI---QLE 378
+T+ ++ ++ F A+ +GG+ E EIEV D AF ALL+YIY ++ +
Sbjct: 43 FTAHRVILAARSEYFRALLFGGMREANPGIEIEVADASSIAFDALLRYIYTGKMFLAEYR 102
Query: 379 ADTVLSTLYVAKKYIVPHLAKACVNYLE 462
+ V+ L +A KY L A YL+
Sbjct: 103 EEIVMELLGLAHKYGFLALESAIQGYLK 130
>SB_58957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 301 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYL 459
IE+PDV + FL LL+YIY D L+ L +A ++ + LA C ++
Sbjct: 112 IELPDVPLAPFLILLEYIYTDSCNLKDTNAREVLVLADRFCLDGLAARCEQFI 164
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 95 LDPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASS--ASML 265
LDP V+ N L+SDITF+V +PAH+ VL T S+ A+ML
Sbjct: 46 LDPEAAHRSAWVKSTKDLFLNKALLSDITFVVKGVS----VPAHRVVLITRSAVMAAML 100
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 301 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYL 459
IE+PDV + FL LL+YIY D L+ L +A ++ + LA C ++
Sbjct: 334 IELPDVPLAPFLILLEYIYTDSCNLKDTNAREVLVLADRFCLDGLAARCEQFI 386
Score = 32.7 bits (71), Expect = 0.20
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 95 LDPNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASS--ASML 265
LDP V+ N L+SDITF+V +PAH+ VL T S+ A+ML
Sbjct: 268 LDPEAAHRSAWVKSTKDLFLNKALLSDITFVVKGVS----VPAHRVVLITRSAVMAAML 322
>SB_52003| Best HMM Match : BTB (HMM E-Value=1e-16)
Length = 501
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 125 TVRERNAAMFNNQLMSDITFIVGAPGHTK-IIPAHKYVLATASSASMLCFMEVWQNVNKK 301
T++++ M+ N +SD+ F+ + G + IIPAH+Y LA S F + W K
Sbjct: 70 TIKKQGKYMWKNPYLSDVEFVCTSAGVQEVIIPAHRYALAVGSPVFKTNFEDRWSAEKLK 129
Query: 302 L 304
L
Sbjct: 130 L 130
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 37.9 bits (84), Expect = 0.005
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F A+F +AE QEI + D+ A+LKY+YC ++ L S A ++ H
Sbjct: 55 FKALFTTEMAEKNCQEISL-DISTRTLKAILKYVYCGDVSLNVSNARSVFVAADYLMMDH 113
Query: 433 LAKACVNYLE 462
L K L+
Sbjct: 114 LKKRAAAILK 123
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 382 DTVLSTLYVAKKYIVPHLAKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRCW 546
D +S + +KYI+P LA CV +LE LS + EP+L CW
Sbjct: 1908 DYSVSQTSLEQKYILPFLADKCVAFLEQNIDHHNAFTLLSQARYYCEPKLEETCW 1962
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 35.5 bits (78), Expect = 0.029
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +1
Query: 262 AMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEI----QLEADTVLSTLYVAKKYIV 426
AMF G AE +EI++ D AF+ LL+Y+Y D++ L+ D L TL A ++ +
Sbjct: 443 AMFGGSFAESSNEEIKLKDTPLKAFIGLLEYLYTDKLSPHESLDEDKQLLTL--ADRFCL 500
Query: 427 PHLAKAC 447
+ C
Sbjct: 501 NRMRSLC 507
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 34.3 bits (75), Expect = 0.067
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF + E +QE + + ++PS +L ++Y I+++ V L + I+
Sbjct: 66 FMAMFTTDMIEKEQERVILKKLKPSVVKEILDFLYTGRIEIDNKNVRDLLEASSFLIISS 125
Query: 433 LAKACVNYLETKXHSIKCMPSLS 501
+ C +LE + C+ LS
Sbjct: 126 VTDKCWQFLEEYLNVETCLIVLS 148
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 33.9 bits (74), Expect = 0.088
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 256 FYAMFYGGLAECKQ-EIEVPDVEPSAFLALLKYIY---CDEIQLEADTVLSTLYVAKKYI 423
F AMF + E ++ +E+ D++P F +LK++Y +IQ AD +L+ A KY
Sbjct: 248 FSAMFEHEMEESRKGRVEILDIDPDVFQEMLKFVYTGNTPQIQGMADDLLA---AADKYD 304
Query: 424 VPHLAKACVNYL 459
+ L C + L
Sbjct: 305 LERLKVMCEDVL 316
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 33.1 bits (72), Expect = 0.15
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +1
Query: 262 AMFYGG--LAECKQEIEVPDVEPSAFLALLKYIYCDEI-QLEADTVLSTLYVAKKYIVPH 432
AMF G L +Q + + D FLALL+++Y L D L + +A + +P
Sbjct: 477 AMFMEGHFLEGGRQSVRLRDTNHDHFLALLEFLYTGRCPNLFLDDALGVIALANFFCLPR 536
Query: 433 LAKAC----VNYLETKXHSIKCMPSLSXV 507
L +C V L+ HS + S S +
Sbjct: 537 LVASCEQLVVKELQASMHSDELAVSESVI 565
>SB_1926| Best HMM Match : PH (HMM E-Value=1.4e-23)
Length = 998
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 298 EIEVPDVEPSAFLALLKYIYCDEIQL--EADTVLSTLYVAKKYIVPHLAKACVNYLETKX 471
E+E+ DV L L+K++Y D+ Q+ E +++ ++ + KY + L C L +
Sbjct: 805 ELELSDVSVDVGLTLMKWVYTDKAQIPKEESFLINLVHASNKYRLKDLRLRCEKILMSSV 864
Query: 472 HSIKCM 489
C+
Sbjct: 865 TVSNCI 870
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 KDYTSTQICVSNCKFSFYAMFYGGLAECKQ-EIEVPDVEPSAFLALLKYIYCDEIQLEAD 384
K++ + +I ++ FY +F + E +++ ++ S +L Y+Y EI +
Sbjct: 39 KEFPAHRIVLAASSKYFYGLFTSEMIEKNAPSVKLQELRASVMNHILTYLYTGEITVTEL 98
Query: 385 TVLSTLYVAKKYIVPHLAKACVNYLETKXHSIKCM 489
+ A ++P L YLE S C+
Sbjct: 99 NAEDLIASANYLLIPRLKGIACKYLERHMTSSNCI 133
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 31.1 bits (67), Expect = 0.62
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 155 NNQLMSDITFIV-GAPGHTKIIPAHKYVLATAS 250
NNQ MSD+TF+V G P + HK +LATAS
Sbjct: 485 NNQEMSDVTFVVEGEPFY-----GHKIILATAS 512
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/77 (20%), Positives = 35/77 (45%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHL 435
F AMF G +A + + V ++ +A LL +IY ++ + + V + ++ +
Sbjct: 59 FMAMFSGHMATVDRTVVVQEITSTAMEVLLAFIYQGKLLITEENVEDIFCGSCLLLLDTV 118
Query: 436 AKACVNYLETKXHSIKC 486
AC +++ + C
Sbjct: 119 THACCKFIQERLTLANC 135
>SB_30686| Best HMM Match : BTB (HMM E-Value=0.52)
Length = 137
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +1
Query: 301 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKAC 447
+ P F +++Y+Y +I+ + T TL +A+ + L AC
Sbjct: 10 VRKPGFRHDVFREVIRYLYTGKIEFQNSTAFETLRIAEDLEISDLQHAC 58
>SB_54052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F +F + E QE IE+ + ++ ++Y I++E + + ++P
Sbjct: 60 FRGLFTNDMQEKNQEHIELQVISGDVGEEVISFMYTGAIKVEKENAQDIVMAGDFLLIPS 119
Query: 433 LAKACVNYLETKXHSIKCM 489
L A +LE ++ C+
Sbjct: 120 LKSAAARFLEATLNAENCV 138
>SB_35177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +2
Query: 101 PNWQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATASSAS 259
P+ T T E N + ++ ++SD GH K+ H+ L+++S +S
Sbjct: 363 PSIHLTNATKNESNGLLDHDLMLSDSDDSDDEQGHHKVPKPHRKTLSSSSGSS 415
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,052,612
Number of Sequences: 59808
Number of extensions: 328212
Number of successful extensions: 776
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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