Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0703.Seq
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical pr... 103 6e-23
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 46 2e-05
Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 37 0.008
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 37 0.008
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 35 0.044
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 34 0.077
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 34 0.077
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 34 0.077
AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical... 32 0.24
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 31 0.72
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 30 1.3
Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical p... 29 1.7
Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein. 29 2.2
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 29 2.9
U64857-11|AAC25864.2| 313|Caenorhabditis elegans Hypothetical p... 27 6.7
AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math... 27 6.7
>Z77660-9|CAB01179.1| 602|Caenorhabditis elegans Hypothetical
protein F38H4.7 protein.
Length = 602
Score = 103 bits (248), Expect = 6e-23
Identities = 52/100 (52%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Frame = +1
Query: 256 FYAMFYGGLA----ECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYI 423
F AMF GGL E EIE+PDVEPSAFLALLK++Y DE+++EA++V++TLY AKKY
Sbjct: 218 FDAMFNGGLTPKNTEEALEIELPDVEPSAFLALLKFLYSDEVKIEAESVMTTLYTAKKYA 277
Query: 424 VPHLAKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRC 543
VP + K CV +L+ + LS LF+EP+LM +C
Sbjct: 278 VPAMEKECVRFLKQRLVPDNAFMMLSQAKLFDEPDLMQKC 317
Score = 50.4 bits (115), Expect = 8e-07
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +2
Query: 107 WQATKPTVRERNAAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLATAS 250
WQA K T+RER M+ N+ ++D+ F+VG + IPAHK+VL+ S
Sbjct: 168 WQADKKTLRERIEHMYCNETLADVFFVVGIDDSRQRIPAHKFVLSIGS 215
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 208 KDYTSTQICVSNCKFSFYAMFYGGLAEC-KQEIEVPDVEPSAFLALLKYIYCDEIQLEAD 384
K + ++ +S C F +MF +AEC +EI + ++EP AL+++ Y I ++
Sbjct: 65 KRINAHRVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDS 124
Query: 385 TVLSTLYVAKKYIVPHLAKACVNYLETKXHSIKCM 489
V L A + + AC +YL+ + C+
Sbjct: 125 NVQDILPAACLLQIHEVQTACCDYLKKQLDPSNCL 159
>Z92831-3|CAC70085.1| 276|Caenorhabditis elegans Hypothetical
protein F22G12.6 protein.
Length = 276
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 292 KQEIEVPD-VEPSAFLALLKYIYCDEIQL--EADTVLSTLYVAKKYIVPHLAKACVNYLE 462
K EI++ D V+ AF +++IY DEI L E + +L A + + L CV L
Sbjct: 100 KSEIQISDDVDFEAFHVAIRWIYTDEIDLKMEDEKLLKVCETATSFRLEQLKNVCVQQLG 159
Query: 463 TKXHSIKCM 489
+ H C+
Sbjct: 160 ARLHVDNCI 168
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 143 AAMFNNQLMSDITFIVGAPGHTKIIPAHKYVLA 241
+++ SD+TF A K +PAHKYVLA
Sbjct: 54 SSLLEKPRFSDVTFKF-AGNSLKSVPAHKYVLA 85
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 193 SPRTHKDYTSTQICVSNCKFSFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEI 369
S H+ + ++ +S F AMF GGL E Q I + +V+ L+ Y+Y +
Sbjct: 75 SDDVHQHIHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRM 134
Query: 370 QLEADTVLSTLYVAKKYIVPHLAKACVNYL 459
+++ V + L A + + AC ++
Sbjct: 135 RIDEQNVQTILATASLLQLTCVRDACARFM 164
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 193 SPRTHKDYTSTQICVSNCKFSFYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEI 369
S H+ + ++ +S F AMF GGL E Q I + +V+ L+ Y+Y +
Sbjct: 75 SDDVHQHIHAHRVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRM 134
Query: 370 QLEADTVLSTLYVAKKYIVPHLAKACVNYL 459
+++ V + L A + + AC ++
Sbjct: 135 RIDEQNVQTILATASLLQLTCVRDACARFM 164
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 34.7 bits (76), Expect = 0.044
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F MF L E +EI + D+ ALL + Y E+++ V S + A + +
Sbjct: 76 FRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNVQSIMLGANFFQMLE 135
Query: 433 LAKACVNYLETKXH 474
+ + C N+L T+ H
Sbjct: 136 VVQHCGNFLLTRLH 149
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 33.9 bits (74), Expect = 0.077
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +1
Query: 292 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETKX 471
K+++ + P F L Y+Y + ++ +V L A +++ L C YL+
Sbjct: 78 KEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYL 137
Query: 472 HSIKCM 489
+ C+
Sbjct: 138 DAANCL 143
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 33.9 bits (74), Expect = 0.077
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +1
Query: 292 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETKX 471
K+++ + P F L Y+Y + ++ +V L A +++ L C YL+
Sbjct: 78 KEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYL 137
Query: 472 HSIKCM 489
+ C+
Sbjct: 138 DAANCL 143
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 33.9 bits (74), Expect = 0.077
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = +1
Query: 292 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETKX 471
K+++ + P F L Y+Y + ++ +V L A +++ L C YL+
Sbjct: 78 KEQLTINSKSPQVFELFLNYMYSGTVIIDRSSVSELLRFANNFLIVKLKVYCAAYLDRYL 137
Query: 472 HSIKCM 489
+ C+
Sbjct: 138 DAANCL 143
>AL132877-10|CAB60850.1| 402|Caenorhabditis elegans Hypothetical
protein Y105E8B.4 protein.
Length = 402
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 292 KQEIEVPDVEPSAFLALLKYIYCDEIQLEADT--VLSTLYVAKKYIVPHLAKACVNYL 459
++ IE+ D P++ A++++IY I+ + D + + +A+KY + L C +L
Sbjct: 266 EKRIEILDFSPTSVRAMVEFIYAGVIKSDIDVYQAVDVMQIAEKYQILALKMTCEQHL 323
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 30.7 bits (66), Expect = 0.72
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 FYAMFYGGLAECKQE---IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIV 426
F MF L E + IE D+ ALL + Y E+++ V S + A + +
Sbjct: 76 FRGMFTLDLMEANMKEINIEDSDMNYETVDALLSFAYTGELRITTSNVQSIMLGANFFQM 135
Query: 427 PHLAKACVNYLETKXH 474
+ + C N+L T+ H
Sbjct: 136 LEVVQHCGNFLLTRLH 151
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 298 EIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYL 459
EI++PD F L+ Y D + DTV L +A+ Y + K C Y+
Sbjct: 594 EIKLPDSSADHFQNFLEACYGDP-SINDDTVHGILKIAQSYEAAGIVKRCEEYV 646
>Z30662-10|CAI58651.1| 409|Caenorhabditis elegans Hypothetical
protein T16H12.5b protein.
Length = 409
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIE-VPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF + E + V D+EP LL Y+Y + + S + A KY +
Sbjct: 254 FSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQMAQSLIAAADKYQLDR 313
Query: 433 LAKAC 447
L C
Sbjct: 314 LKVMC 318
>Z30662-9|CAA83138.2| 451|Caenorhabditis elegans Hypothetical
protein T16H12.5a protein.
Length = 451
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIE-VPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF + E + V D+EP LL Y+Y + + S + A KY +
Sbjct: 296 FSAMFEHHMQESDTNMTTVDDIEPEVMRELLVYMYTGQTKYIEQMAQSLIAAADKYQLDR 355
Query: 433 LAKAC 447
L C
Sbjct: 356 LKVMC 360
>Z92822-7|CAH10786.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -2
Query: 457 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 293
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 91 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 145
>Z83244-9|CAH10804.1| 601|Caenorhabditis elegans Hypothetical
protein W06F12.1d protein.
Length = 601
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -2
Query: 457 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 293
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 91 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 145
>Z83244-1|CAB05827.2| 634|Caenorhabditis elegans Hypothetical
protein W06F12.1a protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -2
Query: 457 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 293
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 124 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 178
>AF145376-1|AAD39815.1| 634|Caenorhabditis elegans LIT-1 protein.
Length = 634
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -2
Query: 457 NN*HMP*PDEVQYIFWLHRELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLV 293
+N H P + Y + R +IQ P HH LV+Q Q H Q LV
Sbjct: 124 HNHHQPQAAQPHYSAVVPRSDVIQQPPHFALHHHLQNLVQQQQQQQAHHHHQQLV 178
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 400 ELIIQYLPPVGFHHSKYTLVKQGTQMALHLEPQFLVYILPNL 275
+ +I+ +PP G+ + + + K QMAL L + + LP L
Sbjct: 208 QYLIELIPPGGWSNCSHDIPKTAIQMALDLRNMYSDFPLPYL 249
>U64857-11|AAC25864.2| 313|Caenorhabditis elegans Hypothetical
protein C37C3.9 protein.
Length = 313
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +1
Query: 295 QEIEVPDVEPSAFLALLKYIYCDEIQLEADT-----VLSTLYVAKKYIVPHLAKACVNYL 459
+++ + D P L L+ I + + L D V + L + KY++ +L + CV+YL
Sbjct: 94 KQLNILDESPEDILKLITVISPNSLGLYPDVIDEQNVCTVLRLCDKYLMTNLKQNCVDYL 153
Query: 460 E 462
+
Sbjct: 154 K 154
>AC006648-12|AAF39861.4| 418|Caenorhabditis elegans Btb and math
domain containingprotein 19 protein.
Length = 418
Score = 27.5 bits (58), Expect = 6.7
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 295 QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYL 459
+ + + ++ + F LL+ IY E +E T + LY+A K + + + CV++L
Sbjct: 276 RHVTLQNISAADFQNLLEVIY-GESDVEDHTAHAILYLAHKLEMKLIVQKCVDFL 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,934,678
Number of Sequences: 27780
Number of extensions: 252295
Number of successful extensions: 584
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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