Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0703.Seq
(548 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 41 5e-04
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 39 0.003
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 38 0.004
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 37 0.010
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 36 0.013
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 36 0.018
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 36 0.024
At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Conta... 35 0.031
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 34 0.054
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 32 0.22
At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/PO... 32 0.29
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha... 31 0.67
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 31 0.67
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 31 0.67
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 30 0.89
At3g05675.2 68416.m00633 expressed protein 30 0.89
At3g05675.1 68416.m00632 expressed protein 30 0.89
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 1.5
At3g61400.1 68416.m06875 2-oxoglutarate-dependent dioxygenase, p... 29 2.7
At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR... 28 4.7
At1g64355.1 68414.m07293 expressed protein 28 4.7
At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 27 8.3
At4g27570.1 68417.m03960 glycosyltransferase family protein cont... 27 8.3
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/81 (24%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +1
Query: 208 KDYTSTQICVSNCKFSFYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEAD 384
+ + + +IC+ +F AMF GG E ++IE+P+++ F ++++IY + + +
Sbjct: 550 RTFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFIYTGSVDITNE 609
Query: 385 TVLSTLYVAKKYIVPHLAKAC 447
L A +Y++ L + C
Sbjct: 610 ISKDLLRAADQYLLEGLKRLC 630
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEI 369
F +MFY LAE ++ + D+EP F ALL ++Y D +
Sbjct: 230 FRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSL 267
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +1
Query: 253 SFYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVP 429
+F AMF GG E ++IE+P+++ F ++++IY + + + L A +Y++
Sbjct: 517 AFRAMFDGGYREKDARDIEIPNIKWEVFELMMRFIYTGSVDITNEISKDLLRAADQYLLE 576
Query: 430 HLAKAC 447
L + C
Sbjct: 577 GLKRLC 582
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 36.7 bits (81), Expect = 0.010
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +1
Query: 256 FYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTV--LSTLYVAKKYIV 426
F +MF L E + EI V D+ A A L YIY IQ E + L+ L A+KY +
Sbjct: 189 FRSMFLHDLKEKELSEINVLDMPLDACQAFLSYIY-GNIQNEDFLIHRLALLQAAEKYDI 247
Query: 427 PHLAKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRC 543
L +AC L + + L L++ PEL C
Sbjct: 248 ADLKEACHLSLLDDIDTKNVLERLQNAYLYQLPELKASC 286
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 36.3 bits (80), Expect = 0.013
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 301 IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETK 468
I++ DV A + Y+Y E L+ L +++KY V HL C +L TK
Sbjct: 110 IKISDVSYDALRTFVYYLYTAEACLDEQMACDLLVMSEKYQVKHLKSYCERFLVTK 165
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 35.9 bits (79), Expect = 0.018
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECK-QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F AMF G E Q +E+P++ F ++K+IY I + L A +Y++
Sbjct: 565 FRAMFDGLYKERNAQNVEIPNIRWEVFELMMKFIYSGRINIAKHLAKDLLVAADQYLLEG 624
Query: 433 LAKAC 447
L + C
Sbjct: 625 LKRQC 629
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 35.5 bits (78), Expect = 0.024
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLST 399
F + F E ++IEV D+EP F ALL YIY D + +A++ S+
Sbjct: 241 FESEFLDVTGEEDRDIEVTDMEPKVFKALLHYIYKDALIEDAESSSSS 288
>At1g21780.1 68414.m02726 BTB/POZ domain-containing protein Contains
similarity to gb|AJ000644 SPOP (speckle-type POZ
protein) from Homo sapiens and contains a PF|00651
BTB/POZ domain. ESTs gb|T75841, gb|R89974, gb|R30221,
gb|N96386, gb|T76457, gb|AI100013 and gb|T76456 come
from this gene;supported by full-length
Length = 326
Score = 35.1 bits (77), Expect = 0.031
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +1
Query: 256 FYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEA-DTVLSTLYVAKKYIVP 429
F +MF+ L E + I + D+ + +ALL Y+Y + Q E L+ L A KY +
Sbjct: 186 FKSMFHHDLMEKESSTIHIDDMSRESCMALLSYLYGNITQEEFWKHRLALLGAANKYDIT 245
Query: 430 HLAKACVNYLETKXHSIKCMPSLSXV*LFEEPELMXRC 543
L AC L +S + L L++ +L C
Sbjct: 246 DLKAACEESLMEDINSSNVLERLQEAWLYQLEKLKKGC 283
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 34.3 bits (75), Expect = 0.054
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 256 FYAMFYGGLAECKQE-IEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F A F+G + + I + D+EPS F A+L +IY D + + ST + ++ H
Sbjct: 219 FRAQFFGPIGNNNVDRIVIDDIEPSIFKAMLSFIYTDVLPNVHEITGSTSASSFTNMIQH 278
Query: 433 LAKACVNY 456
L A Y
Sbjct: 279 LLAAADLY 286
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 32.3 bits (70), Expect = 0.22
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 256 FYAMFYGGL-AECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPH 432
F A +G L +E I + DV+ F LL +IY DE+ D + + L A + H
Sbjct: 227 FRAQLFGPLRSENTNCIIIEDVQAPIFKMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQH 286
Query: 433 LAKACVNYLETKXHSI 480
L A Y + +I
Sbjct: 287 LLAAADRYALERLRTI 302
>At4g37610.1 68417.m05321 TAZ zinc finger family protein / BTB/POZ
domain-containing protein contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF02135 : TAZ zinc finger;
similar to Speckle-type POZ protein (SP:O43791) [Homo
sapiens]
Length = 368
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 292 KQEIEVPDVEPSAFLALLKYIY--CDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLET 465
++ I + V A ++++Y C E Q D + L ++ Y+VPHL + C + E+
Sbjct: 94 RKSISILGVPHHALRVFIRFLYSSCYEKQDMEDFAIHLLVLSHVYVVPHLKRVCESEFES 153
>At2g17930.1 68415.m02076 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF02259 FAT domain, PF00454
Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
domain
Length = 3795
Score = 30.7 bits (66), Expect = 0.67
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = +1
Query: 205 HKDYTSTQICVSNCKFSFYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEAD 384
H DYTS+ S + ++ Q + ++P FL L + DE +L A
Sbjct: 932 HVDYTSSNASTSTSSLGGSVISTSSRSKSNQSSNLKQLDPLIFLDALVDVLADENRLHAK 991
Query: 385 TVLSTLYV 408
L+ L V
Sbjct: 992 AALNALNV 999
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 30.7 bits (66), Expect = 0.67
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 286 ECK----QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVN 453
ECK + I +PD+ +LL+++Y ++ + S A KY + +L C N
Sbjct: 59 ECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQDVCRN 118
Query: 454 Y 456
+
Sbjct: 119 H 119
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 30.7 bits (66), Expect = 0.67
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = +1
Query: 286 ECK----QEIEVPDVEPSAFLALLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVN 453
ECK + I +PD+ +LL+++Y ++ + S A KY + +L C N
Sbjct: 59 ECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQYRSLYLAADKYDISYLQDVCRN 118
Query: 454 Y 456
+
Sbjct: 119 H 119
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 30.3 bits (65), Expect = 0.89
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 256 FYAMFYGGLAECKQEIEVPDVEPSAFLALLKYIYCDEI 369
F + F+ E+ + D+EP F ALL+++Y D +
Sbjct: 223 FKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYKDSL 260
>At3g05675.2 68416.m00633 expressed protein
Length = 441
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 352 IYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLE 462
++ D + + L L VAK+ P + ACVNYLE
Sbjct: 96 VHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLE 132
>At3g05675.1 68416.m00632 expressed protein
Length = 441
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 352 IYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLE 462
++ D + + L L VAK+ P + ACVNYLE
Sbjct: 96 VHEDNLCHNVKSALGILSVAKELSCPQIVTACVNYLE 132
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 186 IKVISDISWLLNIAAFLSRTVGFVACQLGSRVAVPGGAGELAGDVVALDD 37
+KVI D S + ++ +RT+ FV G VA G GE V+ L D
Sbjct: 574 VKVILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPD 623
>At3g61400.1 68416.m06875 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967);
1-aminocyclopropane-1-carboxylate oxidase homolog -
Arabidopsis thaliana, PIR:S59548
Length = 370
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 284 QNVNKKLRFQM*SHLRSLLY*S---IFTVMKSNWRQIL 388
Q+ K RF H R ++Y S +FT MK++WR +
Sbjct: 122 QDAELKKRFYSRDHTRKMVYYSNLDLFTAMKASWRDTM 159
>At4g16940.1 68417.m02555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1103
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 280 LAECKQEIEVPDVEPSAFLALLKYIYCDEIQLEADTV--LSTLY 405
L+EC+ IE+PD+ + L +L C + + T+ L LY
Sbjct: 765 LSECENMIEIPDLSKATNLEILDLSNCKSLVMLPSTIGNLQKLY 808
>At1g64355.1 68414.m07293 expressed protein
Length = 199
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -3
Query: 309 NLNFLFTFCQTSIKHSIEAELAVANTYLCAGIIFVCPGAPTIKVISDISWLLNIAAF 139
N +F F F +T K++ L V+ G+ V P APTI S S L ++ F
Sbjct: 38 NKSFFFHFTETKEKNARRDYLRVSIVCDAGGMFPVDPWAPTIDSQSIASQLFAVSLF 94
>At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1294
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 280 LAECKQEIEVPDVEPSAFLALLKYIYCDEI 369
L+ CK +EVPD+ + L L YC +
Sbjct: 632 LSRCKYLVEVPDLSKATNLEELNLSYCQSL 661
>At4g27570.1 68417.m03960 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 453
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 382 LPPVGFHHSKYTLVKQGTQMALHLEPQFLVYILPNL 275
+PP G+ SK L KQ LEP + + PNL
Sbjct: 154 VPPPGYPSSKVLLRKQDAYTMKKLEPTNTIDVGPNL 189
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,126,342
Number of Sequences: 28952
Number of extensions: 221704
Number of successful extensions: 524
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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