Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0699.Seq
(548 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 192 4e-50
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 192 4e-50
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 191 5e-50
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 105 6e-24
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 93 2e-20
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 47 2e-06
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.005
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.005
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 32 0.064
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 30 0.20
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 30 0.26
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 29 0.60
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 28 0.79
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 0.79
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 1.8
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 26 3.2
SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|c... 26 4.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 4.2
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 5.6
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 5.6
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 5.6
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 25 7.3
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 7.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 9.7
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 25 9.7
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.7
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 192 bits (467), Expect = 4e-50
Identities = 103/158 (65%), Positives = 118/158 (74%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ + K T++ + D + T + + I + +
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILI---IG 117
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
GTGEFEAGISK+GQTR HALLA+TL KQLIV VNKM
Sbjct: 118 GGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 90.6 bits (215), Expect = 1e-19
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILI 115
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 192 bits (467), Expect = 4e-50
Identities = 103/158 (65%), Positives = 118/158 (74%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ + K T++ + D + T + + I + +
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILI---IG 117
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
GTGEFEAGISK+GQTR HALLA+TL KQLIV VNKM
Sbjct: 118 GGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 90.6 bits (215), Expect = 1e-19
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILI 115
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 191 bits (466), Expect = 5e-50
Identities = 102/158 (64%), Positives = 118/158 (74%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ + K T++ + D + T + + + + +
Sbjct: 61 DKLKAERERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLI---IG 117
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
GTGEFEAGISK+GQTR HALLA+TL KQLIV VNKM
Sbjct: 118 GGTGEFEAGISKDGQTREHALLAYTLGVKQLIVAVNKM 155
Score = 91.1 bits (216), Expect = 1e-19
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
TIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLI 115
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 105 bits (251), Expect = 6e-24
Identities = 61/156 (39%), Positives = 90/156 (57%), Gaps = 5/156 (3%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 235 AERERGI-----QSILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVAAG 399
ERE+G ++ + + + P T + + SQ + ++ ++A
Sbjct: 296 EEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGA-SQADIGVLV----ISAR 350
Query: 400 TGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
GEFEAG + GQTR HA+LA T L+V +NKM
Sbjct: 351 RGEFEAGFERGGQTREHAVLARTQGINHLVVVINKM 386
Score = 50.8 bits (116), Expect = 1e-07
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXSCR 398
T+++ FET +++DAPGH+ ++ NMI G SQAD VL+ S R
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISAR 350
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 93.5 bits (222), Expect = 2e-20
Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 235 AERERGIQSILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLR-LIALCSS-------V 390
ER RG+ + +AST S + EI ++ + +IA SS V
Sbjct: 235 EERARGV-------TMDVASTTFESDKKI-YEIGDAPGHRDFISGMIAGASSADFAVLVV 286
Query: 391 AAGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
+ FE G +NGQTR HA L L +++V VNK+
Sbjct: 287 DSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKL 325
Score = 52.4 bits (120), Expect = 4e-08
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+
Sbjct: 242 TMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLV 285
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 46.8 bits (106), Expect = 2e-06
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXS 392
TI A ++ET+ + +D PGH D+IKNMITG + D A+++ S
Sbjct: 103 TISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVS 148
Score = 37.1 bits (82), Expect = 0.002
Identities = 42/153 (27%), Positives = 65/153 (42%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 229 LKAERERGIQSILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVAAGTGE 408
E+ RG I +S + T +D + +I +++
Sbjct: 94 APEEKARG---ITISSAHVEYETANRHYAHVDCPGH----ADYIKNMITGAATMDGAIIV 146
Query: 409 FEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
A + QTR H LLA + KQ++V +NK+
Sbjct: 147 VSATDGQMPQTREHLLLARQVGVKQIVVYINKV 179
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
+ V +ID+PGH DF + D A+++
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.005
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 26.2 bits (55), Expect = 3.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
+ V +ID+PGH DF + D A+++
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 31.9 bits (69), Expect = 0.064
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 247 RGI 255
+GI
Sbjct: 111 KGI 113
Score = 28.7 bits (61), Expect = 0.60
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
FE S Y + IID PGH DF + D AVL+
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLV 175
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 30.3 bits (65), Expect = 0.20
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76
Query: 247 RGI 255
RGI
Sbjct: 77 RGI 79
Score = 27.9 bits (59), Expect = 1.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
TI+ A F + +ID PGH DF + + D AV I
Sbjct: 80 TINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAI 123
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.9 bits (64), Expect = 0.26
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Frame = -1
Query: 413 SNSPVPAATDEHSAISLRGSCDHVL--DEIS--VSRSINDGNIVLASFELPESNIDCIPR 246
S+S ++ + +SL SC L DE S SRS N + ++ IP+
Sbjct: 116 SSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGHGDIPIPK 175
Query: 245 SRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 132
A S+ N++ + +D LP + S V+L +P H
Sbjct: 176 KNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 279 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
F+ ++T +D PGH F G + AD VL+
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLV 250
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 28.3 bits (60), Expect = 0.79
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
+V+ +D PGH + M+ G + D A+L+
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLL 138
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 37 PKMGKEKTHINIVVIGHVDSGKST 108
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 28.3 bits (60), Expect = 0.79
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLI 386
IID PGH F GTS + A+L+
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILV 579
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
Y + +ID+PGH DF + + + D A ++
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVL 124
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +3
Query: 270 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 247 RGI 255
RGI
Sbjct: 104 RGI 106
>SPAC15E1.04 |||thymidylate synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 4.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 540 NLGSLYGGQWNHFVYSY 490
+LG +YG QW HF Y
Sbjct: 432 DLGPIYGFQWRHFGAQY 448
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 4.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 250 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 152
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 258 IDIALWKFETSKYYV--TIIDAPGHRDFIKN 344
I+I + E +++ T+ID PG DFI N
Sbjct: 73 IEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -1
Query: 317 SINDGNIVLASFELPESNIDCIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 138
S++ + L S+ P S + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 229 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 101
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 309 IDAPGHRDFIKNMITGTSQADCAVLI 386
ID PGH DF+ + + +D VL+
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLV 239
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 184 PGPPSRTSRWYVCQYHHIC 128
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.6 bits (51), Expect = 9.7
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Frame = +1
Query: 166 FEKEAQEMGKGSFKYAWVLDKLKAERERGIQSI----LLSGSSKLASTML--PSLMLLDT 327
F++ + G Y L+KLK ER +QS+ + S + +L PS+ +LD
Sbjct: 1747 FQQATKPDGSNKSSYMERLEKLKQNSERHLQSVGGKKVYSSEETPVNKILVSPSVSILDH 1806
Query: 328 E--ISSRT*SQEPLRLIALCSSVAAG 399
+S T + P R + + + +G
Sbjct: 1807 NRILSQSTPIKSPQRAQEMLAGLLSG 1832
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 244 ERGIQSILLSGSSKLASTMLPSLML--LDTEISSRT 345
ER +QSI +SKL + LP+++L +D I S++
Sbjct: 8 ERMLQSIRSHKNSKLENQRLPAILLHSIDNYIDSKS 43
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 353 CDHVLDEISVSRSINDGNIVLASFEL 276
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,162,145
Number of Sequences: 5004
Number of extensions: 41145
Number of successful extensions: 165
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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