Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0699.Seq
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 174 4e-44
03_01_0547 + 4093196-4093657,4094267-4095148 174 4e-44
03_01_0544 + 4082528-4082989,4083585-4084466 174 4e-44
03_01_0543 + 4076981-4077442,4078145-4079026 174 4e-44
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 101 4e-22
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 101 4e-22
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 81 6e-16
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 55 3e-08
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 54 6e-08
02_04_0462 + 23131433-23132836 50 9e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 50 2e-06
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 34 0.086
07_01_1023 + 8840754-8842988,8843189-8843362 32 0.35
03_05_0511 + 25056018-25059107 32 0.35
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 32 0.35
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.46
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.61
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.61
01_06_0662 + 30987187-30987277,30987825-30990214 31 0.61
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 31 0.80
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.80
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 31 0.80
10_08_0016 + 14127200-14127615,14127723-14127816,14127904-141280... 30 1.4
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 1.4
09_01_0015 + 370242-370306,370429-370497,371087-371161,371558-37... 29 1.8
11_06_0660 - 26005210-26006150,26006440-26006467,26007307-260078... 29 2.4
02_04_0148 - 20198407-20201424 29 2.4
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 29 2.4
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 3.2
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 28 4.3
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 28 5.6
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 28 5.6
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 5.6
10_04_0017 - 7629457-7629477,7629900-7629978,7631449-7631593,763... 27 9.9
07_03_1359 - 25985936-25986083,25986424-25986782,25987026-259871... 27 9.9
05_03_0312 - 12172565-12172645,12172920-12172982,12173077-121731... 27 9.9
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 27 9.9
01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819 27 9.9
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 174 bits (423), Expect = 4e-44
Identities = 97/158 (61%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ ++K T++ + D + T + + + + S
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST- 119
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
TG FEAGISK+GQTR HALLAFTL KQ+I NKM
Sbjct: 120 --TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 174 bits (423), Expect = 4e-44
Identities = 97/158 (61%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ ++K T++ + D + T + + + + S
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST- 119
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
TG FEAGISK+GQTR HALLAFTL KQ+I NKM
Sbjct: 120 --TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 174 bits (423), Expect = 4e-44
Identities = 97/158 (61%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ ++K T++ + D + T + + + + S
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST- 119
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
TG FEAGISK+GQTR HALLAFTL KQ+I NKM
Sbjct: 120 --TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 174 bits (423), Expect = 4e-44
Identities = 97/158 (61%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ ++K T++ + D + T + + + + S
Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST- 119
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
TG FEAGISK+GQTR HALLAFTL KQ+I NKM
Sbjct: 120 --TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKM 155
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 101 bits (242), Expect = 4e-22
Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERERGIQ---SILLSGSSKLASTMLPS---LMLLDTEISSRT*SQEPLRLIALCSSVAAG 399
ERERG+ ++ + K +L S + IS T + + ++ C
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDAC------ 359
Query: 400 TGEFEAGISKN-----GQTRXHALLAFTLRXKQLIVGVNKM 507
TG FEAG+ GQT+ HA L + +QLIV VNKM
Sbjct: 360 TGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKM 400
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 101 bits (242), Expect = 4e-22
Identities = 62/161 (38%), Positives = 89/161 (55%), Gaps = 11/161 (6%)
Frame = +1
Query: 58 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERERGIQ---SILLSGSSKLASTMLPS---LMLLDTEISSRT*SQEPLRLIALCSSVAAG 399
ERERG+ ++ + K +L S + IS T + + ++ C
Sbjct: 306 ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDAC------ 359
Query: 400 TGEFEAGISKN-----GQTRXHALLAFTLRXKQLIVGVNKM 507
TG FEAG+ GQT+ HA L + +QLIV VNKM
Sbjct: 360 TGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKM 400
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 81.0 bits (191), Expect = 6e-16
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 7/146 (4%)
Frame = +1
Query: 91 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIQSILL 270
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G +
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKG--KTVE 61
Query: 271 SGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSS-------VAAGTGEFEAGISK 429
G + T +LD + + +I+ S ++A GEFE G K
Sbjct: 62 VGRAHF-ETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEK 120
Query: 430 NGQTRXHALLAFTLRXKQLIVGVNKM 507
GQTR H LLA TL +LIV +NKM
Sbjct: 121 GGQTREHVLLAKTLGVAKLIVVINKM 146
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 55.2 bits (127), Expect = 3e-08
Identities = 19/44 (43%), Positives = 34/44 (77%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T+ + + F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L+
Sbjct: 299 TMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILV 342
Score = 49.2 bits (112), Expect = 2e-06
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Frame = +1
Query: 187 MGKGSFKYAWVLDKLKAERERGIQ---SILLSGSSKLASTMLPS---LMLLDTEISSRT* 348
+GKGSF YAW +D+ ERERGI + + +L S + IS T
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQ 335
Query: 349 SQEPLRLIALCSSVAAGTGEFEAGISKN--GQTRXHALLAFTLRXKQLIVGVNKM 507
S + +I A G FEAG+ N GQT+ H+ L + LIV VNKM
Sbjct: 336 SDAAILVI------DASIGSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKM 384
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXSCR 398
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+ S R
Sbjct: 18 TVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISAR 65
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 388 VAAGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
++A GEFE G + GQTR H LLA TL +L+V +NKM
Sbjct: 62 ISARKGEFETGYERGGQTREHVLLAKTLGVSKLVVVINKM 101
>02_04_0462 + 23131433-23132836
Length = 467
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXS 392
TI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ S
Sbjct: 120 TINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 165
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 40 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 198
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXS 392
TI A ++ET+K + +D PGH D++KNMITG +Q D +L+ S
Sbjct: 117 TIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVS 162
Score = 34.7 bits (76), Expect = 0.049
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 198
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 33.9 bits (74), Expect = 0.086
Identities = 26/63 (41%), Positives = 30/63 (47%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 247 RGI 255
RGI
Sbjct: 103 RGI 105
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 422 IPASNSPVPAATDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCI 252
IP+ + AA S+IS G C+ + S N+ N +S +LPE ID I
Sbjct: 123 IPSKKLIIKAAQHYTSSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLPEETIDNI 179
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.35
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLI 386
V +ID+PGH DF + + +D A+++
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALIL 105
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 31.9 bits (69), Expect = 0.35
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 261 DIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXSC 395
D AL FE + Y + +ID+PGH DF + D A+++ C
Sbjct: 83 DAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVVDC 131
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCG 138
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 31.1 bits (67), Expect = 0.61
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 288 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXSC 395
++Y + +ID+PGH DF + D A+++ C
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDC 131
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 31.1 bits (67), Expect = 0.61
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 288 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXSC 395
++Y + +ID+PGH DF + D A+++ C
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDC 131
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 31.1 bits (67), Expect = 0.61
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 288 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIXSC 395
++Y + +ID+PGH DF + D A+++ C
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDC 131
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 138
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 30.7 bits (66), Expect = 0.80
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 232 KAERERGIQSILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVAAGTGEF 411
++ER++ S+ G K+ +L +L+L + SS T S E L + SVA GTG F
Sbjct: 1265 ESERDKSTDSLSNRGEGKVIGRVL-NLLLKEKMFSSETPS-ELKELGTISESVADGTGGF 1322
Query: 412 E 414
E
Sbjct: 1323 E 1323
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 0.80
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 61 HINIVVIGHVDSGKSTTTGHLIYKCG 138
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 30.7 bits (66), Expect = 0.80
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+DSGK+T T ++Y G R E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 247 RGI 255
+GI
Sbjct: 120 KGI 122
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
Y V IID PGH DF + D A+L+
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILV 166
>10_08_0016 +
14127200-14127615,14127723-14127816,14127904-14128033,
14128113-14128245,14128342-14128549,14128683-14128838
Length = 378
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 202 FKYAWVLDKLKAERERGIQSILLSGSSKLASTMLP 306
F Y W+ ++++ E+ +G+ I GSSK+ ST P
Sbjct: 332 FTYFWIKEQIEKEKTQGV-DIAGYGSSKVVSTQAP 365
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 165
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>09_01_0015 +
370242-370306,370429-370497,371087-371161,371558-371591,
371659-373132,373193-373310,373374-373419
Length = 626
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Frame = +1
Query: 130 KCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIQSILLSGSSK---LASTM 300
KC I + F K+A + W + KLK + +++IL GS+ L +T+
Sbjct: 302 KCMDISQAEFFPFSKKAIFLQNDVLNAIWSIQKLKKGDLKLLRAILCQGSNDEMLLKTTV 361
Query: 301 LPSLMLLDTEISSRT*SQEPLRLIALCSSV 390
L+ E E LR IALC+ +
Sbjct: 362 RRYLIDCLFECDEGDLPDEALRAIALCNQM 391
>11_06_0660 -
26005210-26006150,26006440-26006467,26007307-26007838,
26008863-26009008
Length = 548
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 419 PASNSPVPAATDEHSAISLRGSCDHVLDEISVSRSINDGNIV 294
P +PVPAA ++ A + G D ++ E+S+ RS + +IV
Sbjct: 216 PVPPNPVPAAQEDSEAAAAFGKID-LIRELSILRSFSHEHIV 256
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 67 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 189
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLI 386
V +ID+PGH DF + AD A+++
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVL 117
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 139 GIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIQSILLSGSSKL 288
G+ I EKE +E+ + AWV+ L A +RGI I+L G L
Sbjct: 263 GVLNAIIASLEKEDEELAT---EVAWVVVYLSALSDRGISLIVLRGLGNL 309
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLI 386
+ID PGH+ F G+S D A+L+
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILV 515
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 28.3 bits (60), Expect = 4.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 188 WVKDPSNMLGYWTN*RLSVSVVYNR 262
W+ PS+ +GYW N +S +N+
Sbjct: 876 WISSPSSGVGYWGNSEMSQRTFFNQ 900
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 294 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
Y I+D PGH +F M AD AVL+
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLV 249
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSQADCAVLI 386
+ID PGH F G+S D A+L+
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILV 792
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 55 KTHINIVVIGHVDSG 99
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>10_04_0017 -
7629457-7629477,7629900-7629978,7631449-7631593,
7632004-7632109,7632507-7632512
Length = 118
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 282 ETSKYYVTIIDA--PGHRDFIKNMITGTSQADCAVLIXSCRYR*IRSWY 422
+T+K TI P D+ K GT Q C V++ SC I++WY
Sbjct: 41 KTTKEQCTITSTFIPRSLDYEKTDAQGTRQNKCKVVLHSCIR--IKAWY 87
>07_03_1359 -
25985936-25986083,25986424-25986782,25987026-25987153,
25987609-25987727,25988253-25988320
Length = 273
Score = 27.1 bits (57), Expect = 9.9
Identities = 19/95 (20%), Positives = 43/95 (45%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
+ +N G G+ +G + KC + I K E+E + K + + + + L+
Sbjct: 4 RDRVNAAAAGGGGEGRLVQSGIVNKKCDKKAPKRIHKSEREKLKRDKQNDLFNELGNLLE 63
Query: 235 AERERGIQSILLSGSSKLASTMLPSLMLLDTEISS 339
+R+ ++ +L ++++ +L + L E SS
Sbjct: 64 PDRQNNGKACVLGETTRILKDLLSQVESLRKENSS 98
>05_03_0312 -
12172565-12172645,12172920-12172982,12173077-12173152,
12174629-12174773,12175121-12175208
Length = 150
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 318 PGHRDFIKNMITGTSQADCAVLIXSCRYR*IRSWY 422
P D+ K GT Q+ C V++ SC I++WY
Sbjct: 47 PRSLDYEKTDAQGTRQSKCKVVLHSCIR--IKAWY 79
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 392 ATDEHSAISLRGSCDHVLDEISVSRSINDGNIVLA 288
A + I LRG+ +HVLDE RS++D VL+
Sbjct: 359 AMGQACTIVLRGASEHVLDE--AERSLHDALCVLS 391
>01_06_1505 + 37827495-37827977,37828424-37828914,37828997-37829819
Length = 598
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 235 AERERGIQSILLSGSSKLASTMLPSLMLLDTEISSR 342
++R R + ++ LS S +L LPS+ + EIS R
Sbjct: 60 SKRRRALTALSLSLSPELIRVQLPSVAIAGVEISER 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,669,849
Number of Sequences: 37544
Number of extensions: 293835
Number of successful extensions: 846
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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