Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0699.Seq
(548 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 207 7e-56
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 203 8e-55
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 97 1e-22
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 93 1e-21
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 27 0.17
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.88
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.0
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 2.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.7
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 207 bits (505), Expect = 7e-56
Identities = 112/158 (70%), Positives = 123/158 (77%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ +SK T++ + D + T + + + + VA
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI---VA 117
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
AGTGEFEAGISKNGQTR HALLAFTL KQLIVGVNKM
Sbjct: 118 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 155
Score = 97.1 bits (231), Expect = 1e-22
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 72 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 115
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 203 bits (496), Expect = 8e-55
Identities = 110/158 (69%), Positives = 122/158 (77%), Gaps = 3/158 (1%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSSVA 393
DKLKAERERGI ++ ++K T++ + D + T + + + + VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI---VA 117
Query: 394 AGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
AG GEFEAGISKNGQTR HALLAFTL KQLIVGVNKM
Sbjct: 118 AGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 155
Score = 95.9 bits (228), Expect = 2e-22
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
TIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 72 TIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 115
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 97.1 bits (231), Expect = 1e-22
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 255 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 15 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 58
Score = 89.0 bits (211), Expect = 3e-20
Identities = 56/101 (55%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Frame = +1
Query: 214 WVLDKLKAERERGIQ---SILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCS 384
WVLDKLKAERERGI ++ +SK T++ + D + T + + + +
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI-- 58
Query: 385 SVAAGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
VAAGTGEFEAGISKNGQTR HALLAFTL KQLIVGVNKM
Sbjct: 59 -VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 98
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 93.5 bits (222), Expect = 1e-21
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +3
Query: 261 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 42
Score = 75.8 bits (178), Expect = 3e-16
Identities = 37/40 (92%), Positives = 37/40 (92%)
Frame = +1
Query: 388 VAAGTGEFEAGISKNGQTRXHALLAFTLRXKQLIVGVNKM 507
VAAGTGEFEAGISKNGQTR HALLAFTL KQLIVGVNKM
Sbjct: 43 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKM 82
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 26.6 bits (56), Expect = 0.17
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSQADCAVLI 386
VT +D PGH FI G D VL+
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLV 223
Score = 25.4 bits (53), Expect = 0.38
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDSGKST 108
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.88
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 64 INIVVIGHVDSGKST 108
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 56 FSLPIFG*SRITNCV*Y 6
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.0 bits (47), Expect = 2.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 465 HPSXQTAHRRSKQNGSTDHHTVSPDL 542
HPS HR S + +HT+ P +
Sbjct: 322 HPSQYHPHRGSSPHHQHGNHTMGPTM 347
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 285 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 386
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 8.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 466 TLRXKQLIVGVNKMVPLTTI 525
TLR K L VN +VP +I
Sbjct: 230 TLRRKTLFYTVNLIVPCVSI 249
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMG 192
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,930
Number of Sequences: 438
Number of extensions: 2980
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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