Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0696.Seq
(618 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17691 Cluster: Putative uncharacterized protein str-37... 40 0.047
UniRef50_Q6ZTU1 Cluster: CDNA FLJ44225 fis, clone THYMU3006168; ... 37 0.44
UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;... 35 1.8
UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355; ... 34 3.1
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;... 33 4.1
UniRef50_Q6KHR9 Cluster: Expressed protein; n=1; Mycoplasma mobi... 33 5.5
UniRef50_UPI0000D9E51C Cluster: PREDICTED: hypothetical protein;... 33 7.2
UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofund... 33 7.2
UniRef50_UPI000038E0B1 Cluster: hypothetical protein Faci_030002... 32 9.5
UniRef50_UPI0000F31ED7 Cluster: UPI0000F31ED7 related cluster; n... 32 9.5
UniRef50_Q83E27 Cluster: Putative uncharacterized protein; n=12;... 32 9.5
>UniRef50_O17691 Cluster: Putative uncharacterized protein str-37;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein str-37 - Caenorhabditis elegans
Length = 329
Score = 39.9 bits (89), Expect = 0.047
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +3
Query: 93 GQRY*FNHRYTS--LNAFTYKIIYFTIFLVLHTYKFINIFFAFTCKIVDITKYIVNYHGH 266
GQ F +T+ +N+F + F I + YK++ ++FAF C I D+T++I H H
Sbjct: 5 GQLIVFTGLFTAFFVNSFLIYLTLFYITCIRGIYKYMIVWFAFGCIIFDLTEFISRPHIH 64
Query: 267 N 269
N
Sbjct: 65 N 65
>UniRef50_Q6ZTU1 Cluster: CDNA FLJ44225 fis, clone THYMU3006168;
n=2; Homo sapiens|Rep: CDNA FLJ44225 fis, clone
THYMU3006168 - Homo sapiens (Human)
Length = 262
Score = 36.7 bits (81), Expect = 0.44
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +2
Query: 29 RRFIVNNTTYSIKLCFGT*YSRTTLLI*SQIHVFKCLYIQNYIFYYI--FGVTH--V*VY 196
R ++ + T I +C Y+ + + S IHV+ C+YI YI +I + H VY
Sbjct: 150 RAYVYSYTRICIHICIFI-YTYVCMCVCSCIHVYTCVYIHIYIGMHICVYSYMHRYTYVY 208
Query: 197 QHIF-CIHM 220
HI+ CIHM
Sbjct: 209 IHIYICIHM 217
>UniRef50_UPI0000DD7B62 Cluster: PREDICTED: hypothetical protein;
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: hypothetical
protein - Homo sapiens
Length = 182
Score = 34.7 bits (76), Expect = 1.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +3
Query: 102 Y*FNHRYTSLNAFTYKIIYFTIFLVLHTYKFI--NIFFAFTCKIVDITKYI-VNYH 260
Y + + +T + +TY +Y I+ +TY FI N + + C I YI +N H
Sbjct: 98 YTYTYTFTYVYTYTYTYVYTYIYTYTYTYIFIYTNFTYTYNCTYTHICTYIYINTH 153
>UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355;
n=1; Homo sapiens|Rep: CDNA FLJ42813 fis, clone
BRCAN2012355 - Homo sapiens (Human)
Length = 180
Score = 33.9 bits (74), Expect = 3.1
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = -1
Query: 426 VYIFRYLCVGIYICI*SLR*LISETYIA*HI*MMEHKTFKFIEIRL*SYIIIYYVHDN*L 247
VY + Y+CV I+IC+ + + TY+ HI M + T+ ++ I +I ++ +
Sbjct: 61 VYTYTYVCVHIHICVHIYLCMYTHTYMCAHIHMCVY-TYIYVYIYTHIHICVHINMYVSI 119
Query: 246 YIL*Y----LRFYM*MQKIC**TYTC 181
Y+ Y + YM +C TY C
Sbjct: 120 YVYIYTCIQIYIYMYTLYVCTYTYMC 145
>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 187
Score = 33.5 bits (73), Expect = 4.1
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +2
Query: 122 HVFKCLYIQNYIFYYIFGVTHV*VYQHIFC-----IHM*NRRYHKIYS*LSWT*YIMM*D 286
+++ C+YI YI+ YI+ ++ +Y +I+ I++ Y IYS + YI M
Sbjct: 74 YIYICIYIYPYIYIYIYIYPYIYIYIYIYTYIYTHIYICTYLYIYIYSFI----YIYM-- 127
Query: 287 HNLISMNLNVLCSIIYMCYAI*VSLISYLKL*MQMYIPTHKYLKMYTLLF 436
+ I M + IY+ + + +Y L + YI TH Y +Y F
Sbjct: 128 YTYIYMYTYI---YIYIYTYVYICFYTYTYLYIYTYIYTHIYTYIYMSTF 174
>UniRef50_Q6KHR9 Cluster: Expressed protein; n=1; Mycoplasma
mobile|Rep: Expressed protein - Mycoplasma mobile
Length = 840
Score = 33.1 bits (72), Expect = 5.5
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -3
Query: 274 YILCP**LTIYFVISTILHVNAKNMLINLYVCNTKNIVKYIILYVKAFKDVYL 116
YI+ P +F + IL VN KN +NL NI K + + F+D+YL
Sbjct: 215 YIIPP---NFFFRLENILKVNYKNTELNLLNSINNNINKIVEKTISLFEDIYL 264
>UniRef50_UPI0000D9E51C Cluster: PREDICTED: hypothetical protein;
n=2; Eutheria|Rep: PREDICTED: hypothetical protein -
Macaca mulatta
Length = 589
Score = 32.7 bits (71), Expect = 7.2
Identities = 21/103 (20%), Positives = 51/103 (49%)
Frame = -3
Query: 424 IHF*IFVCWYIHLHLKLEITYQRNLYCITHINDGT*NV*IHRNKIMILHHYILCP**LTI 245
++ I++ YIH+H+ + I +++ HI + I+ + + +H YI I
Sbjct: 380 VYILIYIHIYIHIHVYIHIHIHIHIHIYIHIQSIHVYIHIYIHIKICIHIYI------HI 433
Query: 244 YFVISTILHVNAKNMLINLYVCNTKNIVKYIILYVKAFKDVYL 116
+ I +H++ +++ I +++C +I YI +++ Y+
Sbjct: 434 HIYIHIHIHIHFQSVHIYIHICIYIHIHIYIHIHIYTHNQSYI 476
>UniRef50_Q0F227 Cluster: Ion transport protein; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ion transport protein -
Mariprofundus ferrooxydans PV-1
Length = 256
Score = 32.7 bits (71), Expect = 7.2
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 120 YTSLNAFTYKIIYFTIFLVLHTYKFINIFFA 212
YT++ Y IYF F+VL T+ IN+F A
Sbjct: 176 YTAMEMNVYSWIYFVSFVVLGTFVIINLFIA 206
>UniRef50_UPI000038E0B1 Cluster: hypothetical protein Faci_03000226;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03000226 - Ferroplasma acidarmanus fer1
Length = 345
Score = 32.3 bits (70), Expect = 9.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 120 YTSLNAFTYKIIYFT-IFLVLHTYKFINIFF 209
YT L F Y II FT ++L+ Y +IN +F
Sbjct: 307 YTKLEIFVYSIIAFTAALIILYVYSWINTYF 337
>UniRef50_UPI0000F31ED7 Cluster: UPI0000F31ED7 related cluster; n=1;
Bos taurus|Rep: UPI0000F31ED7 UniRef100 entry - Bos
Taurus
Length = 272
Score = 32.3 bits (70), Expect = 9.5
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 119 IHVFKCLYIQNYIFYYIFGVTHV*VYQHIF-CIHM 220
I++ C+YI YI+ Y++ ++ +Y H C HM
Sbjct: 217 IYICMCVYIYMYIYIYVYIYIYIYIYTHTHGCTHM 251
>UniRef50_Q83E27 Cluster: Putative uncharacterized protein; n=12;
Coxiella burnetii|Rep: Putative uncharacterized protein
- Coxiella burnetii
Length = 346
Score = 32.3 bits (70), Expect = 9.5
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3
Query: 520 LKVQXNLHSIKRALSANLWQRNTYNIIWE*QSIHF*IFVCWYIHLHLKLEITYQRNLY 347
LKV+ + +I+ +L +R + Q I +FV W IHL LEI Y+ LY
Sbjct: 180 LKVKRSPEAIRLQTKLSLTKRLYRKGYTKEQIIRLYVFVDWMIHLSEPLEIEYRETLY 237
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,871,829
Number of Sequences: 1657284
Number of extensions: 10900131
Number of successful extensions: 22955
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22677
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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