Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0696.Seq
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.51 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.3  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 135 AFTYKIIYFTIFLVLHTYKFINIFF 209
           +FTY +   TIFL+ H+   I  FF
Sbjct: 151 SFTYYVCNTTIFLIFHSVLPIKRFF 175


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 507 YWTFKILVXNLFLGQLG 557
           YW+F  L+   F+ Q+G
Sbjct: 323 YWSFGFLIIQRFIHQIG 339


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 144 YKIIYFTIFLVLHTY 188
           Y  ++FT+F V+H Y
Sbjct: 525 YLRVFFTVFNVVHCY 539


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 295 YFYEFKRFMFHHLYVLC 345
           ++Y F  F  H L++LC
Sbjct: 116 FYYAFIIFTVHLLFLLC 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,075
Number of Sequences: 336
Number of extensions: 3635
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)