Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0691.Seq
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.4  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.4  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   8.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 502 IFGIRQYFVITTFRY 458
           IFG+  YF I+TF Y
Sbjct: 234 IFGVSFYFFISTFFY 248


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 502 IFGIRQYFVITTFRY 458
           IFG+  YF I+TF Y
Sbjct: 230 IFGVSFYFFISTFFY 244


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 87  DYCPTSDSRAV 119
           DYCPTS+S +V
Sbjct: 669 DYCPTSNSGSV 679


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 464 ECGYNEVLSDSKNKCSP 514
           +CG+   ++D  N CSP
Sbjct: 475 DCGFAGWVTDGNNWCSP 491


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 273  GGDGLQTHWV*CNLQED 223
            GGDG++T  + C  ++D
Sbjct: 1183 GGDGVRTTPIHCQTEQD 1199


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 531 CSHKSEGEHLFLESDS 484
           CSH+   EHL L+ D+
Sbjct: 17  CSHRIVREHLGLKHDN 32


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 531 CSHKSEGEHLFLESDS 484
           CSH+   EHL L+ D+
Sbjct: 331 CSHRIVREHLGLKHDN 346


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 144 TGRGASKQLQR 112
           TGRGASK+L +
Sbjct: 127 TGRGASKKLSK 137


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 531 CSHKSEGEHLFLESDS 484
           CSH+   EHL L+ D+
Sbjct: 564 CSHRIVREHLGLKHDN 579


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 531 CSHKSEGEHLFLESDS 484
           CSH+   EHL L+ D+
Sbjct: 564 CSHRIVREHLGLKHDN 579


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 576 PTFITPRLHINT 541
           P +I P+LH++T
Sbjct: 186 PNYIKPQLHVST 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,626
Number of Sequences: 336
Number of extensions: 3479
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)