Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0691.Seq
(627 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 32 0.004
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 31 0.012
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.8
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 9.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.8
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.8
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.8
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.8
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.8
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 9.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.8
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.8
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.8
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 9.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.8
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 32.3 bits (70), Expect = 0.004
Identities = 21/66 (31%), Positives = 28/66 (42%)
Frame = +3
Query: 33 GPCNANETLVSCKAGCPTDYCPTSDSRAVVACSPPYPCNPGCVCKPNYKLLSQDDERCVL 212
G C +NE C C +CP + + C C PGCVC+ Y L + CV
Sbjct: 35 GKCPSNEIFSRCDGRCQR-FCPNVVPKPL--CIKI--CAPGCVCRLGY--LRNKKKVCVP 87
Query: 213 TTDCPP 230
+ C P
Sbjct: 88 RSKCLP 93
Score = 29.9 bits (64), Expect = 0.021
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 344 SPRCICKDNYFRNDSGICVSAQEC 415
+P C+C+ Y RN +CV +C
Sbjct: 68 APGCVCRLGYLRNKKKVCVPRSKC 91
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 30.7 bits (66), Expect = 0.012
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +3
Query: 33 GPCNANETLVSCKAGCPTDYCPTSDSRAVVACSPPYPCNPGCVCKPNYKLLSQDDERCVL 212
G C +NE C C +CP + + C C PGCVC+ Y L + CV
Sbjct: 35 GKCPSNEIFSRCDGRCQR-FCPNVVPKPL--CIKI--CAPGCVCRLGY--LRNKKKVCVP 87
Query: 213 TTDC 224
+ C
Sbjct: 88 RSKC 91
Score = 29.9 bits (64), Expect = 0.021
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 344 SPRCICKDNYFRNDSGICVSAQEC 415
+P C+C+ Y RN +CV +C
Sbjct: 68 APGCVCRLGYLRNKKKVCVPRSKC 91
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 153 GCVCKPNYKLLSQDDERCVLTTDCP 227
GC CKP Y+ + + C T+CP
Sbjct: 246 GCHCKPGYQ-ADVEKQEC---TECP 266
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 435 RRIARSVTYRNVVITKYCRIPKISVPPQTCESIYTTYLC 551
R + + T RNVV + S PP+ + + Y C
Sbjct: 392 REVEAAATARNVVAPFLIGSRRTSPPPEDWKPLDKCYFC 430
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 205 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 205 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 205 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 205 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 205 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 234
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 221 VCG*HTSLVILTQELIIWFTNAARIT 144
+CG + L I + IWFT + I+
Sbjct: 534 LCGLSSMLCIPGYMIYIWFTTSGTIS 559
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 221 VCG*HTSLVILTQELIIWFTNAARIT 144
+CG + L I + IWFT + I+
Sbjct: 587 LCGLSSMLCIPGYMIYIWFTTSGTIS 612
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 221 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 250
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHGFQHTSSRYSRERSCSRDRNREY 245
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRSRTHDFQHTSSRYSRERSCSRDRNREY 245
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -2
Query: 521 SLRGNTYFWNPTVLRYNHIPVCHASRDSSY 432
SLR T+ + T RY+ C R+ Y
Sbjct: 216 SLRNRTHGFQHTSSRYSRERSCSRDRNREY 245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,302
Number of Sequences: 438
Number of extensions: 4401
Number of successful extensions: 28
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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