Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0690.Seq
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   6.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   6.2  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   8.2  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   8.2  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   8.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   8.2  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   8.2  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 217 FGIGFYIFVKALFGMCI 167
           FGI F +  + +F +C+
Sbjct: 880 FGISFLLVTQTIFALCV 896


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 217 FGIGFYIFVKALF 179
           FG+ FY F+   F
Sbjct: 235 FGVSFYFFISTFF 247


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 217 FGIGFYIFVKALF 179
           FG+ FY F+   F
Sbjct: 231 FGVSFYFFISTFF 243


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 217 FGIGFYIFVKALFGMCINCDCVAVRIAN 134
           F    Y F    F   I CD +A+ + N
Sbjct: 64  FNSYMYAFTHIFFFFAICCDFIALIVVN 91


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 113 VVTLLNLVSNAYSYTVTVDAHAEECFY 193
           + T LNL  N +S T    +HA++  Y
Sbjct: 415 IETDLNLFKNMFSITEPGVSHADDLGY 441


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 113 VVTLLNLVSNAYSYTVTVDAHAEECFY 193
           + T LNL  N +S T    +HA++  Y
Sbjct: 415 IETDLNLFKNMFSITEPGVSHADDLGY 441


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 113 VVTLLNLVSNAYSYTVTVDAHAEECFY 193
           + T LNL  N +S T    +HA++  Y
Sbjct: 415 IETDLNLFKNMFSITEPGVSHADDLGY 441


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 113 VVTLLNLVSNAYSYTVTVDAHAEECFY 193
           + T LNL  N +S T    +HA++  Y
Sbjct: 415 IETDLNLFKNMFSITEPGVSHADDLGY 441


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 113 VVTLLNLVSNAYSYTVTVDAHAEECFY 193
           + T LNL  N +S T    +HA++  Y
Sbjct: 414 IETDLNLFKNMFSITEPGVSHADDLGY 440


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,084
Number of Sequences: 336
Number of extensions: 3267
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)