Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0688.Seq
(409 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 48 3e-06
04_04_0819 - 28312667-28313219,28315157-28316430 48 4e-06
02_05_0264 + 27263562-27264830 45 3e-05
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 43 1e-04
01_05_0509 + 22811184-22812038,22813493-22814020 33 0.066
06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478 30 0.81
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 29 1.1
02_03_0259 + 16934848-16935599,16935659-16935911 29 1.1
01_05_0586 + 23443371-23444645 29 1.1
11_03_0157 + 10897769-10898066,10898308-10899461 29 1.4
04_04_0126 + 22952577-22952871,22952912-22953519,22954125-229545... 29 1.4
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 29 1.9
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 29 1.9
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 29 1.9
06_03_1442 - 30172595-30172606,30172607-30172684,30173034-301734... 28 3.3
06_03_1439 - 30157110-30157121,30157122-30157199,30157549-301579... 28 3.3
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913... 28 3.3
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610... 28 3.3
05_07_0105 - 27716126-27716218,27716548-27716658,27716764-277168... 28 3.3
01_05_0584 + 23435620-23436408,23436966-23437508 28 3.3
01_05_0507 - 22800124-22800163,22800411-22800554,22801291-228018... 28 3.3
11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360 27 4.3
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 27 4.3
04_04_0338 + 24509698-24510042,24510373-24510490,24510539-245106... 27 4.3
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708 27 5.7
06_03_0962 + 26351861-26351899,26353304-26353530,26355183-263554... 27 5.7
06_03_0444 + 20864183-20864436,20864831-20865818 27 5.7
02_05_1018 - 33530834-33530926,33531036-33531098,33531193-335312... 27 5.7
01_06_1540 - 38111557-38111985,38112087-38112311,38112494-381128... 27 5.7
01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077 27 5.7
12_01_0853 + 7996492-7996667,7996751-7997655,7998533-7998624,799... 27 7.6
08_01_0185 + 1558580-1558755,1558848-1559737,1559828-1559919,156... 27 7.6
06_01_0873 - 6693397-6694038,6694231-6694370,6694713-6694930,669... 27 7.6
02_01_0005 + 34436-34498,34578-35120,35566-35643,35823-35915,360... 27 7.6
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 48.0 bits (109), Expect = 3e-06
Identities = 25/71 (35%), Positives = 38/71 (53%)
Frame = +3
Query: 33 PEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFG 212
P F + +F E + + LE+SM R VL++ + G+ +VY G GYL +G
Sbjct: 217 PFTFGVAVFCFEGFSMTLALESSMAERRKFRW---VLSQAVVGIIIVYACFGVCGYLAYG 273
Query: 213 EEVQDSITLSL 245
E +D ITL+L
Sbjct: 274 EATKDIITLNL 284
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 47.6 bits (108), Expect = 4e-06
Identities = 27/76 (35%), Positives = 40/76 (52%)
Frame = +3
Query: 21 PSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGY 200
P+E + ++A E IG+V+PLE R G L M+ + ++Y L G +GY
Sbjct: 223 PTEILYGLGVAVYAFEGIGMVLPLEAEAADKRK---FGGTLALSMAFIAVMYGLFGAMGY 279
Query: 201 LRFGEEVQDSITLSLG 248
L FG +D IT +LG
Sbjct: 280 LAFGAATRDIITTNLG 295
>02_05_0264 + 27263562-27264830
Length = 422
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +3
Query: 48 LTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQD 227
++++A E IG+V+PLE + G+ M + ++Y L G +GY+ FG+ +D
Sbjct: 229 VSVYAFEGIGMVLPLEAEAANKKKFGTTLGL---SMGFIAVMYGLFGAMGYIAFGDATRD 285
Query: 228 SITLSLG 248
IT +LG
Sbjct: 286 IITTNLG 292
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 48 LTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQD 227
+ +F E + + LE SM R VL ++GVT VY+ G GYL +G+ +D
Sbjct: 223 VAVFCFEGFCLTLALEASMSDRRRFRP---VLLHAIAGVTAVYVCFGVCGYLAYGDVTRD 279
Query: 228 SITLSL 245
+TL+L
Sbjct: 280 IVTLNL 285
>01_05_0509 + 22811184-22812038,22813493-22814020
Length = 460
Score = 33.5 bits (73), Expect = 0.066
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = +3
Query: 24 SEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYL 203
SE P SL GV + +SM + + VL + +L Y + LGYL
Sbjct: 251 SELPTALSLYFVCFAGHGVFPTVYSSMNSKK---DFPKVLLISLVLCSLNYAVTAVLGYL 307
Query: 204 RFGEEVQDSITLSL 245
+GE+VQ +TLSL
Sbjct: 308 IYGEDVQAQVTLSL 321
>06_01_0872 + 6687849-6687864,6689622-6690235,6690927-6691478
Length = 393
Score = 29.9 bits (64), Expect = 0.81
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSL 245
TL Y ++G +GYL +G ++ +TL+L
Sbjct: 220 TLAYGVMGVIGYLMYGGSLRSQVTLNL 246
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +3
Query: 81 VMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSI 233
V P+ N +K P I +++ + + VYI F GYL FGE +
Sbjct: 247 VHPIHNELKDPSQ---IKPIVHTSLVLCSTVYITTSFFGYLLFGESTLSDV 294
>02_03_0259 + 16934848-16935599,16935659-16935911
Length = 334
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 77 SCDASRKLNEDPSCDARYLRCIEQRHVRXYTSLHSSWLPRLPAVRRGSPRF 229
+C RKL E P D +R + RH + SS PR A R +PR+
Sbjct: 195 ACAGDRKLPELPVIDRTLIRDVPDRHDEFAAPMRSSPTPR-AASSRPAPRW 244
>01_05_0586 + 23443371-23444645
Length = 424
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSLGDXSL 260
+L Y L LGY+ +G++VQ +TL+L L
Sbjct: 263 SLNYGLTAVLGYMIYGDDVQSQVTLNLPSGKL 294
>11_03_0157 + 10897769-10898066,10898308-10899461
Length = 483
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 78 VVMP-LENSMKTPRAMLGICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDSITLSL 245
+V P + +MK P A + + VT +Y L F+G FG V ITLS+
Sbjct: 287 IVFPNIHAAMKDPSAFTRVSVA---SFAVVTALYTALAFVGASMFGPSVSSQITLSM 340
>04_04_0126 +
22952577-22952871,22952912-22953519,22954125-22954596,
22954882-22954955,22955559-22955937,22956659-22956711
Length = 626
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSLGDXSL 260
T+ Y + LGYL +G++V+ +TL+L + +
Sbjct: 311 TVNYGSMAILGYLMYGDDVKSQVTLNLPEGKI 342
>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
Length = 475
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 57 FAMEAIGVVMPLENSMKTPRAMLG--ICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDS 230
FA +++ +++++K P + ++ T+ Y+L G +GY FG+ D+
Sbjct: 252 FAYSFSNILIEIQDTIKAPPPSEAKVMKSATRLSVATTTVFYMLCGCMGYAAFGDAAPDN 311
Query: 231 ITLSLG 248
+ G
Sbjct: 312 LLTGFG 317
>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
Length = 475
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 57 FAMEAIGVVMPLENSMKTPRAMLG--ICGVLNKGMSGVTLVYILLGFLGYLRFGEEVQDS 230
FA +++ +++++K P + ++ T+ Y+L G +GY FG+ D+
Sbjct: 252 FAYSFSNILIEIQDTIKAPPPSEAKVMKSATRLSVATTTVFYMLCGCMGYAAFGDAAPDN 311
Query: 231 ITLSLG 248
+ G
Sbjct: 312 LLTGFG 317
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 30 WPEFFSL--TIFAMEAIGVVMPLENSMKTPRAMLGICGVLNK-GMSGVTLVYILLGFLGY 200
W F SL FA V++ +++++++ A + + G+S T Y+L G LGY
Sbjct: 261 WRTFQSLGDIAFAYSYSNVLIEIQDTLRSSPAENEVMKKASFIGVSTTTTFYMLCGVLGY 320
Query: 201 LRFGEEVQDSITLSLG 248
FG + G
Sbjct: 321 AAFGNRAPGNFLTGFG 336
>06_03_1442 -
30172595-30172606,30172607-30172684,30173034-30173435,
30173503-30173577,30173667-30173822,30173952-30174143,
30174202-30174208,30175866-30175918
Length = 324
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 113 SCDARYLRCIEQRHVRXYTSLHSSWLPRLPAVRRGSPRFHH 235
SC + LRC+ Q + S+ + W +L A+ S + HH
Sbjct: 162 SCKIQSLRCLRQVAYKDTRSVITGWGRKLAALHALSQKAHH 202
>06_03_1439 -
30157110-30157121,30157122-30157199,30157549-30157950,
30158018-30158092,30158182-30158337,30158467-30158658,
30158717-30158723,30160381-30160433
Length = 324
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 113 SCDARYLRCIEQRHVRXYTSLHSSWLPRLPAVRRGSPRFHH 235
SC + LRC+ Q + S+ + W +L A+ S + HH
Sbjct: 162 SCKIQSLRCLRQVAYKDTRSVITGWGRKLAALHALSQKAHH 202
>06_03_1427 -
30090464-30090475,30090476-30090553,30090903-30091304,
30091372-30091446,30091536-30091691,30091821-30092012,
30093735-30093908,30094966-30095123,30096738-30096914,
30096996-30097035
Length = 487
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 113 SCDARYLRCIEQRHVRXYTSLHSSWLPRLPAVRRGSPRFHH 235
SC + LRC+ Q + S+ + W +L A+ S + HH
Sbjct: 325 SCKIQSLRCLRQVAYKDTRSVITGWGRKLAALHALSQKAHH 365
>06_03_1422 +
30058936-30058975,30059057-30059233,30060848-30061005,
30062063-30062236,30063959-30064150,30064280-30064435,
30064525-30064599,30064667-30065068,30065418-30065495,
30065840-30066173,30066275-30066339
Length = 616
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 113 SCDARYLRCIEQRHVRXYTSLHSSWLPRLPAVRRGSPRFHH 235
SC + LRC+ Q + S+ + W +L A+ S + HH
Sbjct: 325 SCKIQSLRCLRQVAYKDTRSVITGWGRKLAALHALSQKAHH 365
>05_07_0105 -
27716126-27716218,27716548-27716658,27716764-27716815,
27716895-27717034,27717298-27717422,27717514-27717638,
27717853-27717898,27718374-27718947
Length = 421
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 38 ILFAHNFRNGSHRSCDASRKLNE 106
I+ + + RNGS R C+A +KLN+
Sbjct: 240 IMTSESCRNGSERCCEALQKLNK 262
>01_05_0584 + 23435620-23436408,23436966-23437508
Length = 443
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSL 245
+L Y + LGY +GE+VQ +TL+L
Sbjct: 273 SLNYAVTAVLGYKIYGEDVQAQVTLNL 299
>01_05_0507 -
22800124-22800163,22800411-22800554,22801291-22801850,
22803207-22803264,22803885-22804124,22804191-22804315
Length = 388
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 192 LGYLRFGEEVQDSITLSL 245
LGYL +GE+VQ +TL+L
Sbjct: 160 LGYLSYGEDVQVKVTLNL 177
>11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360
Length = 445
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSLG 248
T+ Y+L G +GY FG++ D++ G
Sbjct: 260 TVFYMLCGCMGYAAFGDKSPDNLLTGFG 287
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 FAMEAIGVVMPLENSMKTPRAMLGICGVLNK-GMSGVTLVYILLGFLGYLRFGEEVQDSI 233
FA +++ +++++K+P A G+S T Y+L G LGY FG ++
Sbjct: 260 FAYSYSMILIEIQDTVKSPPAENKTMKKATLLGVSTTTAFYMLCGCLGYAAFGNAAPGNM 319
Query: 234 TLSLG 248
G
Sbjct: 320 LTGFG 324
>04_04_0338 +
24509698-24510042,24510373-24510490,24510539-24510642,
24510823-24511491
Length = 411
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSLG 248
T VY++ G +GY FG + D++ G
Sbjct: 217 TAVYLMCGCVGYAAFGNDSPDNLLTGFG 244
>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
Length = 2033
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 15 KHPSEWPEFFSLTIFAMEAIGVVMPLENSMK 107
KH ++ + SL + ++A+G+VMPL M+
Sbjct: 1771 KHHADVAPYVSLVMLGVQALGLVMPLFAGME 1801
>06_03_0962 +
26351861-26351899,26353304-26353530,26355183-26355421,
26356276-26356495,26358093-26358214,26358428-26358729,
26358776-26358883,26359314-26359376,26359415-26359621,
26359702-26359812,26359899-26360228
Length = 655
Score = 27.1 bits (57), Expect = 5.7
Identities = 23/67 (34%), Positives = 29/67 (43%)
Frame = +3
Query: 6 PLFKHPSEWPEFFSLTIFAMEAIGVVMPLENSMKTPRAMLGICGVLNKGMSGVTLVYILL 185
PLF F T A+ A G V PLE+ + T A + G G V+LVY +
Sbjct: 149 PLFSRYHSLHHSFQATQ-ALTA-GFVTPLESLILTLVAWAPLAGAFMAGHGSVSLVYGHI 206
Query: 186 GFLGYLR 206
YLR
Sbjct: 207 LLFDYLR 213
>06_03_0444 + 20864183-20864436,20864831-20865818
Length = 413
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 150 GMSGVTLVYILLGFLGYLRFGEEVQDSITLSLG 248
G+S T Y+L G LGY FG +I G
Sbjct: 224 GISTTTGFYLLCGCLGYSAFGNAAPGNILTGFG 256
>02_05_1018 -
33530834-33530926,33531036-33531098,33531193-33531236,
33531973-33532118,33532262-33532281,33532365-33532500,
33532585-33532804,33532905-33533085,33533495-33533518,
33534127-33534341,33534425-33534705,33535987-33536210
Length = 548
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSL 245
T +Y +GYL FG++ ITL+L
Sbjct: 387 TAIYGSFAIIGYLMFGDKTLSQITLNL 413
>01_06_1540 -
38111557-38111985,38112087-38112311,38112494-38112854,
38112965-38113058,38113136-38113369,38113891-38113945
Length = 465
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 150 GMSGVTLVYILLGFLGYLRFGEEVQDSITLSLG 248
G+ T+ YI +G GY FG + +I + G
Sbjct: 268 GIGATTIFYISVGCAGYAAFGSDAPGNILTASG 300
>01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077
Length = 247
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 165 TLVYILLGFLGYLRFGEEVQDSITLSLGDXSL 260
+L Y + L YL +GE+VQ +TL+L L
Sbjct: 116 SLNYAVTTLLRYLIYGEDVQAQVTLNLPSGKL 147
>12_01_0853 +
7996492-7996667,7996751-7997655,7998533-7998624,
7998751-7998819,7998949-7999047
Length = 446
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +3
Query: 162 VTLVYILLGFLGYLRFGEEVQDSITLSL 245
V + Y+ + F GY FG V D++ ++L
Sbjct: 275 VAVCYLPVAFAGYYVFGNAVDDNVLITL 302
>08_01_0185 +
1558580-1558755,1558848-1559737,1559828-1559919,
1560018-1560086,1560218-1560316
Length = 441
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 162 VTLVYILLGFLGYLRFGEEVQDSITLSL 245
V L Y + +GY FG V D+I ++L
Sbjct: 270 VALCYFPVALVGYWAFGNHVDDNILITL 297
>06_01_0873 -
6693397-6694038,6694231-6694370,6694713-6694930,
6695040-6695133,6695247-6695483,6696192-6696260,
6696513-6696636
Length = 507
Score = 26.6 bits (56), Expect = 7.6
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 57 FAMEAIGVVMPLENSMKTPRAMLGICGVLNK-GMSGVTLVYILLGFLGYLRFGEEVQDSI 233
FA V++ +++++++P A N M +T Y L G LGY FG ++
Sbjct: 282 FAYSYSLVLIEIQDTIRSPPAESKTMRKANALAMPVITAFYTLCGCLGYAAFGNAAPGNM 341
Query: 234 TLSLG 248
G
Sbjct: 342 LTGFG 346
>02_01_0005 +
34436-34498,34578-35120,35566-35643,35823-35915,
36086-36181,36709-36762,36856-37059,37209-37360,
37365-37440,38185-38193,38577-38708,39042-39107,
39885-40184,40332-40640,40976-40996
Length = 731
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 382 ELRSFREFILNTVPHNVDAHEE 317
E R FRE +L +PH+ D E+
Sbjct: 293 ECREFRESVLGVMPHHWDRRED 314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,321,964
Number of Sequences: 37544
Number of extensions: 192153
Number of successful extensions: 595
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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