Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0687.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   1.1  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   5.8  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 345 EPAFLERPVTDDMLRKRVSITRGCGA 422
           +P F  + VTD ++RK + I  G GA
Sbjct: 163 KPFFYHKYVTDKLIRKSIFILWGIGA 188


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -2

Query: 117 SWIVARRTSAKAFAKGVFINQERKLEVRR 31
           +W++  RT      KG    Q +KLE R+
Sbjct: 23  TWVMVYRTEKYQKLKGEVEKQSKKLEKRK 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,863
Number of Sequences: 2352
Number of extensions: 8985
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)