Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0686.Seq
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XMC5 Cluster: Putative uncharacterized protein; n=1; ...    40   0.034
UniRef50_Q7RD83 Cluster: Putative uncharacterized protein PY0554...    38   0.14 
UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;...    36   0.96 
UniRef50_A5AP77 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_Q95QV4 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_Q8I555 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  

>UniRef50_Q4XMC5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 469

 Score = 40.3 bits (90), Expect = 0.034
 Identities = 24/80 (30%), Positives = 38/80 (47%)
 Frame = -2

Query: 309 MFFFFIK*YCHVFCSFSSSNRFLFFKFLPCTEYT*KYVCSGRIFIFILFNYCSFFYLL*T 130
           + + +++ Y H F        +LF  FLP      K      IF  IL  Y  FF+ L  
Sbjct: 34  VLYKYVEYYLHTFLEHGFVCIYLFVAFLPTKNVYKKRSKYNYIFAKILLIY--FFFFLFH 91

Query: 129 FLMNSCNNFNMTVFFCVCVL 70
           F++N  NNF + VF+ + ++
Sbjct: 92  FIINIKNNFPLNVFYLIIII 111


>UniRef50_Q7RD83 Cluster: Putative uncharacterized protein PY05541;
           n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05541 - Plasmodium yoelii yoelii
          Length = 496

 Score = 38.3 bits (85), Expect = 0.14
 Identities = 22/81 (27%), Positives = 37/81 (45%)
 Frame = -2

Query: 312 YMFFFFIK*YCHVFCSFSSSNRFLFFKFLPCTEYT*KYVCSGRIFIFILFNYCSFFYLL* 133
           Y  + +++ Y H+F  +     ++F  F P      K      IF  IL  Y  FF+   
Sbjct: 38  YNIYKYVEYYLHIFLEYGFVCIYVFVAFQPTKNVYKKRSKYNYIFAKILLIYFFFFFF-- 95

Query: 132 TFLMNSCNNFNMTVFFCVCVL 70
            F++N  NNF +  F+ V ++
Sbjct: 96  HFIINIKNNFPLNAFYLVIII 116


>UniRef50_UPI0000D8A031 Cluster: hypothetical protein, conserved;
           n=1; Eimeria tenella|Rep: hypothetical protein,
           conserved - Eimeria tenella
          Length = 1486

 Score = 35.5 bits (78), Expect = 0.96
 Identities = 28/89 (31%), Positives = 37/89 (41%)
 Frame = -2

Query: 303 FFFIK*YCHVFCSFSSSNRFLFFKFLPCTEYT*KYVCSGRIFIFILFNYCSFFYLL*TFL 124
           F F+  +C  FCSF      LF     C  +   ++ S   F F +F++ SF  L   F 
Sbjct: 545 FLFVFFFCP-FCSFLFFYFLLFLYSFSCFSFL-FFLLS--FFSFFVFSFFSFILLFVFFF 600

Query: 123 MNSCNNFNMTVFFCVCVLMFCDLISL*IF 37
                 F    FFCVC   F   I+  IF
Sbjct: 601 FVFLFLFLFFSFFCVCFSPFFSFINFFIF 629


>UniRef50_A5AP77 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 904

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -3

Query: 311 TCFSFLLNSTVMCF-AHFQAQIDFCFSNSFHALNTHKNMYVLGESLFLSYLIIVLSFIYS 135
           TCF  L+ S V+CF A      D C +NS +     KN  V+     ++ ++++L  I++
Sbjct: 484 TCFPRLIFSLVICFNASLDGNPDLCKTNSCNTKTKKKNSVVVPVVASIASVVVLLGAIFA 543


>UniRef50_Q95QV4 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 122

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = -2

Query: 258 SSNRFLFFKFLPCTEYT*KYVCSGRIFIFILFNYCSFFYLL*TFLMNSCNNFNMTVFF 85
           S+N F F    P       + CS R  I I+ N+  F Y +   L+N CNN N+ +F+
Sbjct: 53  SANNFKFQPVPPQKCQPSSHWCSIRCAIIIVNNFFVFMYYIFLVLVNVCNN-NLLIFY 109


>UniRef50_Q8I555 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 509

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 19/71 (26%), Positives = 32/71 (45%)
 Frame = -2

Query: 285 YCHVFCSFSSSNRFLFFKFLPCTEYT*KYVCSGRIFIFILFNYCSFFYLL*TFLMNSCNN 106
           Y H F  +     ++   FLP      K      IF  +L  Y  FF++   F++N  NN
Sbjct: 47  YIHAFLKYGFVLFYIIVSFLPQRNVYKKRSKLNYIFAKLLLLYFIFFFI--HFVINLFNN 104

Query: 105 FNMTVFFCVCV 73
           F + +F+ + +
Sbjct: 105 FPLNLFYLIII 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,643,991
Number of Sequences: 1657284
Number of extensions: 9191084
Number of successful extensions: 17853
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17833
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)