Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0686.Seq
         (598 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0799 + 7035380-7036148,7036587-7037080                           29   2.1  
07_01_0567 - 4214196-4214351,4214539-4214845,4215005-4215069,421...    28   6.5  

>11_01_0799 + 7035380-7036148,7036587-7037080
          Length = 420

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +1

Query: 337 DIHNQTNSPPNKFKIALMQKCPAQCSGSSFKAV 435
           D+H++T+S P+   ++L+QK   +  G S + V
Sbjct: 367 DVHSETDSTPSDCSVSLLQKMGVEMCGLSLEEV 399


>07_01_0567 -
           4214196-4214351,4214539-4214845,4215005-4215069,
           4215406-4215471,4215594-4215639,4215671-4216200
          Length = 389

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 275 CFAHFQAQ---IDFCFSNSFHALNTHKNMYVLGESLFLSYLIIVLSFI 141
           C +H Q     +  C  NSF  + T  N Y +  ++ +  L+IVL++I
Sbjct: 184 CVSHEQPMKICVQDCEVNSFLVVFTRINQYTISVNMIILALMIVLTYI 231


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,266,625
Number of Sequences: 37544
Number of extensions: 220028
Number of successful extensions: 349
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)