Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0686.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    27   0.61 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.5  
AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transpor...    23   7.5  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   9.9  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -1

Query: 349  DYVYLKMLK*GLVHVFLFY*IVLSCVLLIFKLKSISVFQI 230
            DY++L+ +    VH+F    I L+C  +++ +KS S+  I
Sbjct: 971  DYMFLRQVPIRRVHLFTM--IQLACFAVLWLIKSFSITSI 1008


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 309 MFFFFIK*YCHVFCSFSSSNRFLFFKFLPCT 217
           +F  FI  +   F  FS S  F FF F PCT
Sbjct: 51  LFINFIFMFLLHFVLFSFS--FPFFSFAPCT 79


>AF533894-1|AAM97679.1|  156|Anopheles gambiae ascorbate transporter
           protein.
          Length = 156

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 218 LNTHKNMYVLGESLFLSYLI 159
           +N+ +N+Y+LG S F   ++
Sbjct: 26  INSSRNLYILGVSFFFPLVL 45


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 453 IVPSHNHGLEGTTRAL 406
           ++PSH  G+ GTT  +
Sbjct: 210 VIPSHQTGILGTTEGM 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,158
Number of Sequences: 2352
Number of extensions: 9909
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)