Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0685.Seq
         (604 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   1.4  
Z32645-1|CAA83567.1|  258|Anopheles gambiae chymotrypsinogen-lik...    24   3.3  
Z18888-1|CAA79326.1|  258|Anopheles gambiae chymotrypsin 2 protein.    24   3.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.4  
Z32645-2|CAA83568.1|  259|Anopheles gambiae chymotrypsin-like pr...    23   5.8  
Z18887-1|CAA79325.1|  259|Anopheles gambiae chymotrypsin 1 protein.    23   5.8  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 525 GAPAKNKGYLTLQSSDPLVSPLFYPNFFS 439
           G+PA  K  L++  S P+  P ++P++++
Sbjct: 336 GSPAHRKPLLSMGISFPIFFPTYWPHYWN 364


>Z32645-1|CAA83567.1|  258|Anopheles gambiae chymotrypsinogen-like
           protease ANCHYM2 protein.
          Length = 258

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = +3

Query: 18  FHFQICFFRKHEQPSF*E*VS----LMKAAPRSATIMIAAWG 131
           FH  I   R  +   F E V     L KA P +AT+ +  WG
Sbjct: 116 FHNDIGLMRLEQPVQFSELVQSVEYLEKAVPVNATVRLTGWG 157


>Z18888-1|CAA79326.1|  258|Anopheles gambiae chymotrypsin 2 protein.
          Length = 258

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = +3

Query: 18  FHFQICFFRKHEQPSF*E*VS----LMKAAPRSATIMIAAWG 131
           FH  I   R  +   F E V     L KA P +AT+ +  WG
Sbjct: 116 FHNDIGLMRLEQPVQFSELVQSVEYLEKAVPVNATVRLTGWG 157


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 461  NGETSGSEDCNVKYPLFLA 517
            N +T+ + + N++YP F+A
Sbjct: 1133 NTDTNNATELNIRYPAFMA 1151


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 461  NGETSGSEDCNVKYPLFLA 517
            N +T+ + + N++YP F+A
Sbjct: 1134 NTDTNNATELNIRYPAFMA 1152


>Z32645-2|CAA83568.1|  259|Anopheles gambiae chymotrypsin-like
           protease ANCHYM1 protein.
          Length = 259

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = +3

Query: 18  FHFQICFFRKHEQPSF*E*VSLM----KAAPRSATIMIAAWG 131
           FH  I   R  +   F E V  +    KA P +AT+ +  WG
Sbjct: 116 FHNDIGLVRLEQPVQFSELVQSVEYSEKAVPANATVRLTGWG 157


>Z18887-1|CAA79325.1|  259|Anopheles gambiae chymotrypsin 1 protein.
          Length = 259

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
 Frame = +3

Query: 18  FHFQICFFRKHEQPSF*E*VSLM----KAAPRSATIMIAAWG 131
           FH  I   R  +   F E V  +    KA P +AT+ +  WG
Sbjct: 116 FHNDIGLVRLEQPVQFSELVQSVEYSEKAVPANATVRLTGWG 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,847
Number of Sequences: 2352
Number of extensions: 11679
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)