Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0684.Seq
(612 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 140 3e-32
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 127 2e-28
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 114 2e-24
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 107 2e-22
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 107 2e-22
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 97 3e-19
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 90 3e-17
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 79 1e-13
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 77 4e-13
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 4e-12
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 68 2e-10
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 60 3e-08
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 58 2e-07
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 58 2e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 4e-07
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 56 5e-07
UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=... 44 0.003
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.012
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 42 0.012
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 42 0.012
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 42 0.012
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 38 0.19
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.33
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 37 0.33
UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1; ... 36 0.57
UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating ... 35 1.3
UniRef50_A0C569 Cluster: Chromosome undetermined scaffold_15, wh... 34 2.3
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 34 3.1
UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7... 34 3.1
UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3; Thermoto... 33 4.0
UniRef50_A5BNX9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 33 7.1
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 33 7.1
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 9.3
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 140 bits (338), Expect = 3e-32
Identities = 67/78 (85%), Positives = 71/78 (91%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DTK+ML
Sbjct: 47 RNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEML 106
Query: 72 KMLDFNNINGLQLTQPAT 19
K+LDF+NI GLQLTQP T
Sbjct: 107 KLLDFHNIRGLQLTQPNT 124
Score = 64.9 bits (151), Expect = 1e-09
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRLTLDF TNKRICEE+AIIPTKPL K+
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKI 50
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 127 bits (306), Expect = 2e-28
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 114 bits (274), Expect = 2e-24
Identities = 49/79 (62%), Positives = 65/79 (82%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKI G+ HLM+R+R VRGISIKLQEEERE RDNYVPE+S L+ + +EVDPDTK+ML
Sbjct: 47 RNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVPEISVLDQETVEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQPATQ 16
++LDF +++ LQ+T+P +
Sbjct: 107 ELLDFVSLSNLQVTRPTVE 125
Score = 36.7 bits (81), Expect = 0.43
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKLL 237
IEKY TRL DF TNK +C EIAII +K L K++
Sbjct: 18 IEKYCTRLGNDFYTNKCVC-EIAIILSKKLRNKIV 51
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 107 bits (257), Expect = 2e-22
Identities = 47/75 (62%), Positives = 63/75 (84%)
Frame = -1
Query: 249 NKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 70
NKI G+ HLM+R++ VRGISIKLQE+ERER+DNYVPE+SA + + IEVDPDTK+M K
Sbjct: 102 NKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVPEISATDQETIEVDPDTKEMRK 161
Query: 69 MLDFNNINGLQLTQP 25
+L+F +++ LQ+TQP
Sbjct: 162 VLNFVSLSNLQVTQP 176
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -2
Query: 338 EKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKLL 237
++YYT L +F +NKR CEE II +K L K++
Sbjct: 72 DQYYTPLGKNFCSNKRACEETTIILSKKLCNKIV 105
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 107 bits (257), Expect = 2e-22
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKI + THLM+R++ VRGISIKLQEEERERRDNYVPE SAL+ +IIEVDPDTK ML
Sbjct: 102 RNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEGSALDQEIIEVDPDTKKML 161
Query: 72 KMLDFNNINGLQLTQP 25
+ F ++ Q TQP
Sbjct: 162 NLPGFGRLSNFQDTQP 177
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNK +CEEIAIIP++ L K+
Sbjct: 72 IEKYYTRLGNDFHTNKHVCEEIAIIPSENLRNKI 105
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 97.1 bits (231), Expect = 3e-19
Identities = 45/76 (59%), Positives = 62/76 (81%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
++KIAG+ THL ++++ VRGISIKLQEEER R +Y+PEVSAL+ +I EVDP TK+ML
Sbjct: 84 QSKIAGYVTHLTKQIQRGPVRGISIKLQEEER--RADYIPEVSALDQEITEVDPATKEML 141
Query: 72 KMLDFNNINGLQLTQP 25
K+LD +++ LQ+TQP
Sbjct: 142 KLLDLGSLSNLQVTQP 157
Score = 41.5 bits (93), Expect = 0.015
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
+ +Y+TRL DF T+K +CEEI I+P+K L K+
Sbjct: 54 VPEYHTRLGNDFYTDKHVCEEITIVPSKKLQSKI 87
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 90.2 bits (214), Expect = 3e-17
Identities = 44/82 (53%), Positives = 58/82 (70%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNK+AGF THLMRR++ VRGIS+KLQEEERERR ++VPE SALE + I VD +T +ML
Sbjct: 47 RNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEML 106
Query: 72 KMLDFNNINGLQLTQPATQGGY 7
L ++ G++ Q + Y
Sbjct: 107 AALGMADLPGVERQQEVSAPTY 128
Score = 49.2 bits (112), Expect = 8e-05
Identities = 20/34 (58%), Positives = 29/34 (85%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYY+R+TLDF TNK++ EE++I+P+K L K+
Sbjct: 17 IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKV 50
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/61 (59%), Positives = 49/61 (80%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAGFATHL++R++ V+GIS+K+QEEERERR +YVPE S+++ D + D D K ML
Sbjct: 87 RNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLDYVPEKSSVDIDNLRGDQDVKRML 146
Query: 72 K 70
+
Sbjct: 147 E 147
Score = 39.1 bits (87), Expect = 0.081
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYY +LT DF NK+I E+ +P+K L K+
Sbjct: 57 IEKYYMKLTSDFHFNKKILSEVGQVPSKKLRNKI 90
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 76.6 bits (180), Expect = 4e-13
Identities = 38/76 (50%), Positives = 55/76 (72%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RN IAG+ HL +R++ V + ER +++ YVPEVSAL+ +IIEVDPDT++ML
Sbjct: 96 RNGIAGYVAHLTKRIQQGPVA------RGGER-KKETYVPEVSALDQEIIEVDPDTQEML 148
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 149 KLLDFGSLSNLQVTQP 164
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPL 252
+EK+Y RL F TNKR+CE+IAI P+K L
Sbjct: 66 LEKHYPRLGSHFHTNKRVCEDIAISPSKKL 95
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = -1
Query: 234 FATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFN 55
F HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDI---IEVDPDTK 82
+NKIAG+ TH+M+RL VRGIS+KLQEEERERR ++ P S ++ I + VD T
Sbjct: 47 KNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVDKKTM 106
Query: 81 DMLKMLD 61
ML+ L+
Sbjct: 107 QMLQRLE 113
Score = 34.7 bits (76), Expect = 1.8
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
+EKYY++L DF NKR+ ++ I +K L K+
Sbjct: 17 VEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKI 50
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = -1
Query: 249 NKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 70
+KIAG+ THLM+ +R S + +S R R NYVPE S L+ +I EVD TK+MLK
Sbjct: 48 SKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLK 106
Query: 69 MLDFNNIN 46
+ F +++
Sbjct: 107 LPGFGSVS 114
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +2
Query: 491 HWPSVLNRRDWENPALPNLIALQHIPLFAAGVIAEEARTD 610
HWPS N + ALPNLIALQHIPL AGVI+EEARTD
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTD 44
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/31 (87%), Positives = 27/31 (87%)
Frame = -2
Query: 482 YDSL*GELGTGPPLEVDGIDKLDIEFAAASA 390
YDSL GELGTGPPLEVDGIDKLDIEF SA
Sbjct: 278 YDSLYGELGTGPPLEVDGIDKLDIEFPIESA 308
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = -1
Query: 132 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 25
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
+N+IAG+ T L +++ + IK EEERER++N +P+ S L+ D +EVD T +M+
Sbjct: 47 KNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMI 106
Query: 72 K 70
K
Sbjct: 107 K 107
>UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=1;
Mus musculus|Rep: Beta-D-galactosidase fusion protein -
Mus musculus (Mouse)
Length = 121
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3
Query: 463 NWVPGPPSRSTVSISLISNS 404
+WVPGPPSRSTVSISLISNS
Sbjct: 18 SWVPGPPSRSTVSISLISNS 37
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 41.9 bits (94), Expect = 0.012
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 529 PCVTQLNRLAAHSPFRSWRNS 591
P VTQLNRLAAH PF SWRNS
Sbjct: 80 PGVTQLNRLAAHPPFASWRNS 100
Score = 39.9 bits (89), Expect = 0.047
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +2
Query: 503 VLNRRDWENPALPNLIALQHIPLFAAGVIAEEARTD 610
VL RRDWENP + L L P FA+ +EEARTD
Sbjct: 71 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 106
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 41.9 bits (94), Expect = 0.012
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 529 PCVTQLNRLAAHSPFRSWRNS 591
P VTQLNRLAAH PF SWRNS
Sbjct: 34 PGVTQLNRLAAHPPFASWRNS 54
Score = 39.9 bits (89), Expect = 0.047
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +2
Query: 503 VLNRRDWENPALPNLIALQHIPLFAAGVIAEEARTD 610
VL RRDWENP + L L P FA+ +EEARTD
Sbjct: 25 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 60
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 41.9 bits (94), Expect = 0.012
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 529 PCVTQLNRLAAHSPFRSWRNS 591
P VTQLNRLAAH PF SWRNS
Sbjct: 38 PGVTQLNRLAAHPPFASWRNS 58
Score = 39.9 bits (89), Expect = 0.047
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +2
Query: 503 VLNRRDWENPALPNLIALQHIPLFAAGVIAEEARTD 610
VL RRDWENP + L L P FA+ +EEARTD
Sbjct: 29 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 64
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 41.9 bits (94), Expect = 0.012
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 529 PCVTQLNRLAAHSPFRSWRNS 591
P VTQLNRLAAH PF SWRNS
Sbjct: 20 PGVTQLNRLAAHPPFASWRNS 40
Score = 40.3 bits (90), Expect = 0.035
Identities = 22/46 (47%), Positives = 27/46 (58%)
Frame = +2
Query: 473 VSRITIHWPSVLNRRDWENPALPNLIALQHIPLFAAGVIAEEARTD 610
++ IT VL RRDWENP + L L P FA+ +EEARTD
Sbjct: 1 MTMITDSLAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD 46
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 37.9 bits (84), Expect = 0.19
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -2
Query: 335 KYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
KY+ LT+DF NK C+EIA+I +K L K+
Sbjct: 19 KYFKHLTIDFQENKFFCDEIALITSKSLRNKI 50
Score = 34.7 bits (76), Expect = 1.8
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -1
Query: 261 QAFRNKIAGFATHLMRRLRHSQVRGI--SIKLQEEERERRDNYVPEVSALEHDIIEVDPD 88
++ RNKIAG+ THL++ + + I +IK E + S E + VD +
Sbjct: 44 KSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEINNKESEVFSNTELKLNLVDDE 103
Query: 87 TKDMLKMLDFNNIN 46
TK M+K L F N N
Sbjct: 104 TKQMIKKL-FPNKN 116
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 37.1 bits (82), Expect = 0.33
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -1
Query: 192 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQG 13
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQT 171
Query: 12 GYG 4
+G
Sbjct: 172 LHG 174
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 37.1 bits (82), Expect = 0.33
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPL 252
I+KY T DF+TNKR+ EE+A I TK L
Sbjct: 17 IKKYRDLFTTDFETNKRVLEEVAQISTKRL 46
>UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1;
Bacillus coagulans 36D1|Rep: GCN5-related
N-acetyltransferase - Bacillus coagulans 36D1
Length = 180
Score = 36.3 bits (80), Expect = 0.57
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3
Query: 457 VPGPPSRSTVSISLISNSR 401
VPGPPSRSTVSISL+ NS+
Sbjct: 2 VPGPPSRSTVSISLMFNSK 20
>UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating
factor DNA sequence; n=2; Eukaryota|Rep: Nicotiana
tabacum (clone 5) activating factor DNA sequence -
Nicotiana tabacum (Common tobacco)
Length = 56
Score = 35.1 bits (77), Expect = 1.3
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 458 GTGPPLEVDGIDKLDI 411
GTGPPLEV GIDKLDI
Sbjct: 22 GTGPPLEVRGIDKLDI 37
>UniRef50_A0C569 Cluster: Chromosome undetermined scaffold_15, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_15,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1270
Score = 34.3 bits (75), Expect = 2.3
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -1
Query: 261 QAFRNKI-AGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDT 85
++FRNK+ A + + + + Q R IKL+EEER RR N + E + + V +
Sbjct: 61 ESFRNKVYAEYQDVVPSQSKAEQERAARIKLREEERLRRKNGLGSAYEQEKERLPVQLEQ 120
Query: 84 KDMLKMLDFNN 52
K + + NN
Sbjct: 121 KLLQNLNQMNN 131
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 479 RITIHWPSVLNRRDWENPALPNLIALQHIPLFAAGVIAEEARTD 610
++ + P +L+RRDWENP + L+ P F + E A+ D
Sbjct: 10 QVQLSLPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKD 53
>UniRef50_Q4X214 Cluster: C6 finger domain protein, putative; n=7;
Trichocomaceae|Rep: C6 finger domain protein, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 1148
Score = 33.9 bits (74), Expect = 3.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 496 PVNCNTTHYRANWVPGPPSRSTVS 425
PV N +R W+PGPP+RS +S
Sbjct: 619 PVTDNPPDFRKEWIPGPPTRSVLS 642
>UniRef50_Q9WY64 Cluster: Flagellar M-ring protein; n=3;
Thermotogaceae|Rep: Flagellar M-ring protein -
Thermotoga maritima
Length = 532
Score = 33.5 bits (73), Expect = 4.0
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = -1
Query: 243 IAGFATHLMRRLRHSQVRGISIKLQEEERERR-DNYVPEVSALEHDIIEVDPDTKDMLKM 67
+ GF T ++ L Q+R I + EER R+ + V E+ E EV P+ K++L++
Sbjct: 446 LLGFLTFMLIYLMIVQIRRIRARKLAEERRRKLEEEVKEILQEELKEEEVSPEEKELLEL 505
Query: 66 LD 61
L+
Sbjct: 506 LE 507
>UniRef50_A5BNX9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 759
Score = 33.1 bits (72), Expect = 5.3
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = -2
Query: 338 EKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKLLDLPHI**GVSDTRK------CEESLS 177
+K TR+ + TN+R+ E I ++ TKPL K+ + + GV +K +E++
Sbjct: 340 KKAETRIFIGTTTNQRLIEFICLMLTKPLSAKMSNSWRMINGVGMLKKNQNLEFLDENID 399
Query: 176 NFRKRSVRGVTTMSQKC 126
+ R R ++ + Q+C
Sbjct: 400 DIPVRGTRSLSNIYQRC 416
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 32.7 bits (71), Expect = 7.1
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -2
Query: 311 DFDTNKRICEEIAIIPTKPL 252
+F NKR+C+EIAIIP+K L
Sbjct: 21 NFHRNKRVCKEIAIIPSKKL 40
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 32.7 bits (71), Expect = 7.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IE + + T DFDTNK++ EE + + TK L K+
Sbjct: 17 IETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKI 50
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 9.3
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 228 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 73
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,201,960
Number of Sequences: 1657284
Number of extensions: 10483972
Number of successful extensions: 27732
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 26974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27719
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -