Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0684.Seq
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 127 4e-29
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 127 4e-29
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 127 4e-29
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 127 4e-29
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 127 4e-29
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 127 4e-29
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 127 4e-29
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 127 4e-29
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 127 4e-29
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 127 4e-29
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 118 2e-26
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 30 5.6
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 30 5.6
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 30 5.6
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 30 5.6
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 29 9.8
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 29 9.8
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 29 9.8
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 29 9.8
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 29 9.8
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 127 bits (306), Expect = 4e-29
Identities = 57/76 (75%), Positives = 69/76 (90%)
Frame = -1
Query: 252 RNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML 73
RNKIAG+ THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+ML
Sbjct: 47 RNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEML 106
Query: 72 KMLDFNNINGLQLTQP 25
K+LDF +++ LQ+TQP
Sbjct: 107 KLLDFGSLSNLQVTQP 122
Score = 54.4 bits (125), Expect = 3e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLGIKL 240
IEKYYTRL DF TNKR+CEEIAIIP+K L K+
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKI 50
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 118 bits (283), Expect = 2e-26
Identities = 52/75 (69%), Positives = 65/75 (86%)
Frame = -1
Query: 249 NKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 70
NK AG+ THLM++++ VRGISIKLQEE RERRDNYVPE+SAL+ +IIEVDPDTK+MLK
Sbjct: 48 NKTAGYVTHLMKQIQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLK 107
Query: 69 MLDFNNINGLQLTQP 25
+LDF ++ LQ+TQP
Sbjct: 108 LLDFGGLSNLQVTQP 122
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -2
Query: 341 IEKYYTRLTLDFDTNKRICEEIAIIPTKPL 252
IEKYY L DF TNK +C+EIAIIP+K L
Sbjct: 17 IEKYYMHLGNDFHTNKHMCKEIAIIPSKKL 46
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = -1
Query: 300 K*KNM*RNRYHSYQAFRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA 121
K + M + SYQ ++ +L Q + +++KLQE+ER ++ + E
Sbjct: 510 KNEEMMEQKEKSYQEHVKQLTEKMERDRAQLMAEQEKTLALKLQEQERLLKEGFENESKR 569
Query: 120 LEHDIIEVDPDTKDM 76
L+ DI ++ +K +
Sbjct: 570 LQKDIWDIQMRSKSL 584
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = -1
Query: 300 K*KNM*RNRYHSYQAFRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA 121
K + M + SYQ ++ +L Q + +++KLQE+ER ++ + E
Sbjct: 510 KNEEMMEQKEKSYQEHVKQLTEKMERDRAQLMAEQEKTLALKLQEQERLLKEGFENESKR 569
Query: 120 LEHDIIEVDPDTKDM 76
L+ DI ++ +K +
Sbjct: 570 LQKDIWDIQMRSKSL 584
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = -1
Query: 300 K*KNM*RNRYHSYQAFRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA 121
K + M + SYQ ++ +L Q + +++KLQE+ER ++ + E
Sbjct: 510 KNEEMMEQKEKSYQEHVKQLTEKMERDRAQLMAEQEKTLALKLQEQERLLKEGFENESKR 569
Query: 120 LEHDIIEVDPDTKDM 76
L+ DI ++ +K +
Sbjct: 570 LQKDIWDIQMRSKSL 584
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 30.3 bits (65), Expect = 5.6
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = -1
Query: 300 K*KNM*RNRYHSYQAFRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSA 121
K + M + SYQ ++ +L Q + +++KLQE+ER ++ + E
Sbjct: 510 KNEEMMEQKEKSYQEHVKQLTEKMERDRAQLMAEQEKTLALKLQEQERLLKEGFENESKR 569
Query: 120 LEHDIIEVDPDTKDM 76
L+ DI ++ +K +
Sbjct: 570 LQKDIWDIQMRSKSL 584
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 29.5 bits (63), Expect = 9.8
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -1
Query: 171 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 61
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 29.5 bits (63), Expect = 9.8
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -1
Query: 171 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 61
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 29.5 bits (63), Expect = 9.8
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -1
Query: 171 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 61
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 29.5 bits (63), Expect = 9.8
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -1
Query: 171 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 61
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 29.5 bits (63), Expect = 9.8
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -1
Query: 171 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 61
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,547,111
Number of Sequences: 237096
Number of extensions: 1636165
Number of successful extensions: 4576
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4576
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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