Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0682.Seq
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    24   0.88 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.88 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   1.5  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   2.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   3.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   4.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   6.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   6.2  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 144 WFSRKNIRGRADETD 188
           W+  K++RGR DE D
Sbjct: 462 WYVPKSLRGRKDEAD 476


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -2

Query: 446 RQERRKYEEFFSMQLGGFQFPYRF*ILDTNAFHVLGAPCENLSIVV 309
           +QE  ++  F S  L  F     F I  +    VLG  C  L I+V
Sbjct: 303 KQELYEFSNFVSQHLPKFSAANFFDIERSTILSVLGTACTFLIIIV 348



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/24 (29%), Positives = 10/24 (41%)
 Frame = -2

Query: 293 RWICPTVFENRHNSICEFNNIAGR 222
           RW C T        + EF+N   +
Sbjct: 292 RWYCQTATMEEKQELYEFSNFVSQ 315


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 98  SMFGWTLGIFKYST 57
           SM GW  G +KYST
Sbjct: 98  SMGGWNEGSYKYST 111


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 369 IGYQRISCLGSPLRKS 322
           I +++I C  SPLRK+
Sbjct: 55  IDFRKIQCSNSPLRKA 70


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -2

Query: 158 FTAKPISFACLVKNLTQSL*SMFGW-TLGIFKYSTKLAID 42
           F  K     C +K L       FGW  + I  YS+ + ++
Sbjct: 190 FAKKMEGLVCSIKELNMIFNEFFGWPIIMIILYSSLMVLN 229


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 568 KPMKSSLGRCHSFHPKRNQYESFKFIHFN 482
           K  +++LG   S HP +   E    +H N
Sbjct: 281 KNPENTLGTMLSIHPSKLDVEQMNLLHSN 309


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 190 VVLTWTGKEPNLPAILL 240
           V+ TW     NLP +LL
Sbjct: 457 VIQTWVPASDNLPTLLL 473


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 329 ENLSIVVYVSAKRWICPTVFEN 264
           +NL +V     K W  P V  N
Sbjct: 97  QNLKVVATTKTKAWFLPFVVTN 118


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 543 DAIPFIQSETNMRALNSFILT 481
           DA+ FI +  N R   S ILT
Sbjct: 296 DAVAFIDNHDNQRTGGSQILT 316


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 543 DAIPFIQSETNMRALNSFILT 481
           DA+ FI +  N R   S ILT
Sbjct: 297 DAVAFIDNHDNQRTGGSQILT 317


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 543 DAIPFIQSETNMRALNSFILT 481
           DA+ FI +  N R   S ILT
Sbjct: 297 DAVAFIDNHDNQRTGGSQILT 317


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 98  SMFGWTLGIFKYSTKLAIDGL 36
           SM GW  G  KYS   A  GL
Sbjct: 99  SMGGWNEGSQKYSQVAANPGL 119


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = -2

Query: 98  SMFGWTLGIFKYSTKLAIDGL 36
           SM GW  G  KYS   A  GL
Sbjct: 99  SMGGWNEGSQKYSQVAANPGL 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,893
Number of Sequences: 336
Number of extensions: 3307
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)