Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0679.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    26   0.16 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   2.7  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   4.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   4.7  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 236 FHFYRVYLHTHTFFFFIIC 292
           F+ Y +Y  TH FFFF IC
Sbjct: 64  FNSY-MYAFTHIFFFFAIC 81


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 218 CVFFYKFHFYRVYLHT 265
           C+ FY + FY  Y++T
Sbjct: 81  CLPFYSYFFYLSYIYT 96


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 218 CVFFYKFHFYRVYLHT 265
           C+ FY + FY  Y++T
Sbjct: 37  CLPFYSYFFYLSYIYT 52


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 242 FYRVYLHTHTFFFFIICKLRIFL 310
           ++ + L++H F F+I C + I +
Sbjct: 514 YFMIGLNSHGFRFYIACGIMILV 536


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -1

Query: 241 VKLIKKNARVNHSAVQWSSLTLGNR 167
           V  I KN    + AVQ SSLT G R
Sbjct: 52  VTFILKNPPNLNPAVQGSSLTEGKR 76


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +2

Query: 332 NIFFAHFRSIH*YICSQYV*IAYYHQ 409
           NI F  F +   ++ ++ + +AYY Q
Sbjct: 118 NIIFVLFHTYEAFVWTRIMGVAYYEQ 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,076
Number of Sequences: 336
Number of extensions: 2336
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)