Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0679.Seq
         (499 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC033142-1|AAH33142.2|  464|Homo sapiens C20orf151 protein protein.    29   9.0  
BC006450-1|AAH06450.1|  464|Homo sapiens C20orf151 protein protein.    29   9.0  
AL121832-6|CAI23285.1|  664|Homo sapiens chromosome 20 open read...    29   9.0  
AK074919-1|BAC11293.1|  664|Homo sapiens protein ( Homo sapiens ...    29   9.0  

>BC033142-1|AAH33142.2|  464|Homo sapiens C20orf151 protein protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 269 CVCASTHGRSETYKKKRKGQPLRSAMEQP 183
           C+C   HG+    K+KR  +P   A ++P
Sbjct: 402 CICTQEHGQGPPRKRKRASEPGDKASKKP 430


>BC006450-1|AAH06450.1|  464|Homo sapiens C20orf151 protein protein.
          Length = 464

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 269 CVCASTHGRSETYKKKRKGQPLRSAMEQP 183
           C+C   HG+    K+KR  +P   A ++P
Sbjct: 402 CICTQEHGQGPPRKRKRASEPGDKASKKP 430


>AL121832-6|CAI23285.1|  664|Homo sapiens chromosome 20 open reading
           frame 151 protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 269 CVCASTHGRSETYKKKRKGQPLRSAMEQP 183
           C+C   HG+    K+KR  +P   A ++P
Sbjct: 602 CICTQEHGQGPPRKRKRASEPGDKASKKP 630


>AK074919-1|BAC11293.1|  664|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90438 fis, clone NT2RP3000871. ).
          Length = 664

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 269 CVCASTHGRSETYKKKRKGQPLRSAMEQP 183
           C+C   HG+    K+KR  +P   A ++P
Sbjct: 602 CICTQEHGQGPPRKRKRASEPGDKASKKP 630


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,295,053
Number of Sequences: 237096
Number of extensions: 1210528
Number of successful extensions: 2727
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2614
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2727
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)