Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0679.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003636-1|AAO39640.1|  874|Drosophila melanogaster AT18238p pro...    28   6.1  
AE014298-2464|AAF48654.2|  877|Drosophila melanogaster CG13008-P...    28   6.1  
BT014649-1|AAT27273.1| 1254|Drosophila melanogaster RE21490p pro...    28   8.1  
AE014298-1702|AAF48104.2| 1219|Drosophila melanogaster CG1886-PA...    28   8.1  

>BT003636-1|AAO39640.1|  874|Drosophila melanogaster AT18238p
           protein.
          Length = 874

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 23/92 (25%), Positives = 38/92 (41%)
 Frame = -3

Query: 416 VCFDDNTRSIRTGCKCINECS*SERRRYFTRTSPMLKICGACIL*KKRMCVCASTHGRSE 237
           +C DDN  +     +   E   SE   +  +T P  ++CG     +    V +   GR +
Sbjct: 99  ICNDDNDNNDDNDDE---EYVGSEPNDFQYQTKPSPRLCGGS---ESPRIVKSKFKGRKK 152

Query: 236 TYKKKRKGQPLRSAMEQPHPWEPLEFTCSDIC 141
             +  RK       M+Q H +E LE    ++C
Sbjct: 153 QTRTSRKKNHHGQVMQQGHTYERLEELHREVC 184


>AE014298-2464|AAF48654.2|  877|Drosophila melanogaster CG13008-PA,
           isoform A protein.
          Length = 877

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 23/92 (25%), Positives = 38/92 (41%)
 Frame = -3

Query: 416 VCFDDNTRSIRTGCKCINECS*SERRRYFTRTSPMLKICGACIL*KKRMCVCASTHGRSE 237
           +C DDN  +     +   E   SE   +  +T P  ++CG     +    V +   GR +
Sbjct: 99  ICNDDNDNNDDNDDE---EYVGSEPNDFQYQTKPSPRLCGGS---ESPRIVKSKFKGRKK 152

Query: 236 TYKKKRKGQPLRSAMEQPHPWEPLEFTCSDIC 141
             +  RK       M+Q H +E LE    ++C
Sbjct: 153 QTRTSRKKNHHGQVMQQGHTYERLEELHREVC 184


>BT014649-1|AAT27273.1| 1254|Drosophila melanogaster RE21490p
           protein.
          Length = 1254

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 256 VHTVEVKLIKKNARVNHSAVQW 191
           +H++EV+L  KNARV +   Q+
Sbjct: 121 IHSIEVQLAAKNARVQYDPAQY 142


>AE014298-1702|AAF48104.2| 1219|Drosophila melanogaster CG1886-PA
           protein.
          Length = 1219

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 256 VHTVEVKLIKKNARVNHSAVQW 191
           +H++EV+L  KNARV +   Q+
Sbjct: 121 IHSIEVQLAAKNARVQYDPAQY 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,931,983
Number of Sequences: 53049
Number of extensions: 389661
Number of successful extensions: 943
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)