Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0678.Seq
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 151 3e-37
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 113 9e-26
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 104 5e-23
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 103 1e-22
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 103 1e-22
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 101 4e-22
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 98 5e-21
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 94 8e-20
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 94 8e-20
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 90 9e-19
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 69 2e-12
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 67 8e-12
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 67 1e-11
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 67 1e-11
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 67 1e-11
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 67 1e-11
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 64 5e-11
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 62 4e-10
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 60 9e-10
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 60 9e-10
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 60 9e-10
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical ... 54 8e-08
AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical ... 54 8e-08
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 50 2e-06
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 46 2e-05
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 46 2e-05
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 46 2e-05
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 45 4e-05
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical pr... 31 0.81
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 30 1.1
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 29 1.9
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 29 1.9
Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 27 7.5
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 27 7.5
AC006748-3|AAF60513.2| 382|Caenorhabditis elegans Hypothetical ... 27 7.5
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 27 10.0
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 27 10.0
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 27 10.0
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 151 bits (367), Expect = 3e-37
Identities = 79/112 (70%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
Frame = -3
Query: 588 PRMVRXVFRLAKEIAQQSFSLMKLMPFY*K-I*RPNWCRREVQRILLELLNQMDGFDQTT 412
PRMVR VFRLAKE + + ++ K REVQRILLELLNQMDGFDQ+T
Sbjct: 240 PRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQST 299
Query: 411 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLS 256
NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+FST+ ++MNLS
Sbjct: 300 NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLS 351
Score = 105 bits (253), Expect = 2e-23
Identities = 45/62 (72%), Positives = 56/62 (90%)
Frame = -2
Query: 253 EVDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNIKKDESEYEF 74
+VDLE++VARPD++SGADIN+ICQEAGM AVRENRY+VL KD EK YKN +KKD +++EF
Sbjct: 353 DVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEF 412
Query: 73 YK 68
YK
Sbjct: 413 YK 414
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 113 bits (272), Expect = 9e-26
Identities = 59/111 (53%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Frame = -3
Query: 588 PRMVRXVFRLAKEIAQQSFSLMKLMPFY*KI*RPN-WCRREVQRILLELLNQMDGFDQTT 412
P+MVR +FR+A+E A + ++ K N RE+QR +LELLNQ+DGFD
Sbjct: 267 PKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRG 326
Query: 411 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNL 259
+VKV+MATNR ++LDPAL+RPGR+DRKIEFPLPD + KR IF T++M L
Sbjct: 327 DVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTL 377
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = -2
Query: 253 EVDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNI--KKDESEY 80
EV+LEEF+ D +SGADI A+C EAG+ A+RE R V +DF+K +N + KK+ +
Sbjct: 380 EVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKEGAPE 439
Query: 79 EFY 71
E Y
Sbjct: 440 ELY 442
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 104 bits (249), Expect = 5e-23
Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Frame = -3
Query: 585 RMVRXVFRLAKEIAQQSFSLMKLMPF-Y*KI*RPNWCRREVQRILLELLNQMDGFDQTTN 409
RMVR +F +A+E A + ++ ++ + EVQR +LELLNQ+DGF+ T N
Sbjct: 239 RMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKN 298
Query: 408 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNL 259
+KVIMATNR D LDPALLRPGR+DRKIEFP PD + + I + KMNL
Sbjct: 299 IKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNL 348
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNIKKDESE 83
SGA++ ++C EAGM A+RE R V +DFE ++KD +
Sbjct: 365 SGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEK 407
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 103 bits (246), Expect = 1e-22
Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Frame = -3
Query: 585 RMVRXVFRLAKEIAQQSFSLMKLMPF-Y*KI*RPNWCRREVQRILLELLNQMDGFDQTTN 409
RMVR +F +A+E A + ++ ++ EVQR +LELLNQ+DGF+ T N
Sbjct: 234 RMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKN 293
Query: 408 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSVKWIWKSSW 229
+KVIMATNR D LD ALLRPGR+DRKIEFP PD + + I + KMNL +
Sbjct: 294 IKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNL-----MRGIR 348
Query: 228 LDRTACPAPTSTPSVRRPACTLSG 157
+D+ A P ++ + + CT +G
Sbjct: 349 MDKIAEQIPGASGAEVKSVCTEAG 372
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNIKKDESE 83
SGA++ ++C EAGM A+RE R V +DFE ++KD +
Sbjct: 360 SGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEK 402
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 103 bits (246), Expect = 1e-22
Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 1/144 (0%)
Frame = -3
Query: 585 RMVRXVFRLAKEIAQQSFSLMKLMPF-Y*KI*RPNWCRREVQRILLELLNQMDGFDQTTN 409
RMVR +F +A+E A + ++ ++ EVQR +LELLNQ+DGF+ T N
Sbjct: 255 RMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKN 314
Query: 408 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSVKWIWKSSW 229
+KVIMATNR D LD ALLRPGR+DRKIEFP PD + + I + KMNL +
Sbjct: 315 IKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNL-----MRGIR 369
Query: 228 LDRTACPAPTSTPSVRRPACTLSG 157
+D+ A P ++ + + CT +G
Sbjct: 370 MDKIAEQIPGASGAEVKSVCTEAG 393
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNIKKDESE 83
SGA++ ++C EAGM A+RE R V +DFE ++KD +
Sbjct: 381 SGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEK 423
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 101 bits (242), Expect = 4e-22
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Frame = -3
Query: 585 RMVRXVFRLAKEIAQQSFSLMKLMPFY*K-I*RPNWCRREVQRILLELLNQMDGFDQTTN 409
R+VR +F++AKE A + ++ K + +EVQR LLELLNQ+DGF+ +
Sbjct: 263 RLVRQIFQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGD 322
Query: 408 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNL 259
VK+IMATNR D+LDPAL+RPGR+DRKIE P PD + ++ IF+ T+ M +
Sbjct: 323 VKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTI 372
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = -2
Query: 250 VDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIVLPKDFEKGYKN 107
V E + + +SGA+I A+C EAGM A+R R V DFEK K+
Sbjct: 376 VTYENVLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAVKS 423
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 97.9 bits (233), Expect = 5e-21
Identities = 52/105 (49%), Positives = 66/105 (62%)
Frame = -3
Query: 471 EVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 292
EVQR +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD +
Sbjct: 296 EVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAH 355
Query: 291 IFSTITTKMNLSVKWIWKSSWLDRTACPAPTSTPSVRRPACTLSG 157
I +M++ + D A P ST + R CT +G
Sbjct: 356 ILKIHAKQMSVE-----RDIRYDLLARLCPNSTGAEIRSVCTEAG 395
Score = 37.1 bits (82), Expect = 0.009
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNIK 98
+GA+I ++C EAGM A+R R + KDF + +K
Sbjct: 383 TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK 420
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 93.9 bits (223), Expect = 8e-20
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = -3
Query: 474 REVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 295
RE+QR L+ELLNQ+DGFD VKVIMATNR DTLDPALLRPGRLDRKIE LP+ + +
Sbjct: 260 REIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRL 319
Query: 294 LIFSTITTKM 265
I + K+
Sbjct: 320 EILKIHSNKI 329
Score = 47.2 bits (107), Expect = 9e-06
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -2
Query: 256 GEVDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIVLPKDFEKGYK--NNIKKDESE 83
GE+D E V D S AD+ +C EAGM A+R R V+ +DF K + + K+ E++
Sbjct: 333 GEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETK 392
Query: 82 YEF 74
++
Sbjct: 393 LDY 395
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 93.9 bits (223), Expect = 8e-20
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = -3
Query: 474 REVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 295
RE+QR L+ELLNQ+DGFD VKVIMATNR DTLDPALLRPGRLDRKIE LP+ + +
Sbjct: 268 REIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRL 327
Query: 294 LIFSTITTKM 265
I + K+
Sbjct: 328 EILKIHSNKI 337
Score = 47.2 bits (107), Expect = 9e-06
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -2
Query: 256 GEVDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIVLPKDFEKGYK--NNIKKDESE 83
GE+D E V D S AD+ +C EAGM A+R R V+ +DF K + + K+ E++
Sbjct: 341 GEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETK 400
Query: 82 YEF 74
++
Sbjct: 401 LDY 403
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 90.2 bits (214), Expect = 9e-19
Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Frame = -3
Query: 585 RMVRXVFRLAKEIAQQSFSLMKLMPFY*K-I*RPNWCRREVQRILLELLNQMDGFDQTTN 409
++VR F LAKE A + +L K REVQR +LELLNQ+DGF +
Sbjct: 257 KLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDD 316
Query: 408 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLS 256
+KVI ATNR D LDPALLR GRLDRKIE P P+ + I + KMN++
Sbjct: 317 IKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVN 367
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -2
Query: 253 EVDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNIKKDESEYEF 74
+V+ EE D +GA A+C EAGM A+R + +L +DF K ++ +
Sbjct: 369 DVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLNY 428
Query: 73 Y 71
Y
Sbjct: 429 Y 429
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFS 283
R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I PLPD + IF
Sbjct: 604 RVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFK 663
Query: 282 TITTKMNLS 256
K LS
Sbjct: 664 ASLRKTPLS 672
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = -3
Query: 465 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 286
+RI+ +LL MDG +V VI ATNR +++D AL R GR DR+I+ +PD + I
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 386
Query: 285 STITTKMNL 259
T M L
Sbjct: 387 RIHTKNMKL 395
Score = 36.3 bits (80), Expect = 0.016
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAILLK 500
F C+++SPAI+FIDEIDAI K
Sbjct: 295 FAECEKNSPAILFIDEIDAIAPK 317
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 289 LLDNHYQDEPFGE-VDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIV 140
+L H ++ GE VDLE+ GAD+ ++C EA + +RE ++
Sbjct: 385 ILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELI 435
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 68.9 bits (161), Expect = 2e-12
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFS 283
R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I PLPD + IF
Sbjct: 604 RVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFK 663
Query: 282 TITTKMNLS 256
K LS
Sbjct: 664 ASLRKTPLS 672
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/69 (42%), Positives = 40/69 (57%)
Frame = -3
Query: 465 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 286
+RI+ +LL MDG +V VI ATNR +++D AL R GR DR+I+ +PD + I
Sbjct: 327 KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 386
Query: 285 STITTKMNL 259
T M L
Sbjct: 387 RIHTKNMKL 395
Score = 36.3 bits (80), Expect = 0.016
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAILLK 500
F C+++SPAI+FIDEIDAI K
Sbjct: 295 FAECEKNSPAILFIDEIDAIAPK 317
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -2
Query: 289 LLDNHYQDEPFGE-VDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIV 140
+L H ++ GE VDLE+ GAD+ ++C EA + +RE ++
Sbjct: 385 ILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELI 435
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 67.3 bits (157), Expect = 8e-12
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFS 283
R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I PLPD + I
Sbjct: 606 RVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILK 665
Query: 282 TITTKMNLS 256
K LS
Sbjct: 666 ASLRKTPLS 674
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = -3
Query: 465 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 286
+RI+ +LL MDG +N+ VI ATNR +++D AL R GR DR+I+ +PD + I
Sbjct: 328 RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEIL 387
Query: 285 STITTKMNLS 256
T M L+
Sbjct: 388 RIHTKNMKLA 397
Score = 34.7 bits (76), Expect = 0.050
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAILLK 500
F C+++ PAI+FIDEIDAI K
Sbjct: 296 FEECEKNQPAILFIDEIDAIAPK 318
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 253 EVDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIV 140
+VDLE+ GAD+ ++C EA + +RE ++
Sbjct: 399 DVDLEQIANECHGFVGADLASLCSEAALQQIREKMELI 436
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R I
Sbjct: 516 IVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDI 575
Query: 279 ITTK 268
T+K
Sbjct: 576 HTSK 579
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R I
Sbjct: 514 IVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDI 573
Query: 279 ITTK 268
T+K
Sbjct: 574 HTSK 577
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R I
Sbjct: 516 IVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDI 575
Query: 279 ITTK 268
T+K
Sbjct: 576 HTSK 579
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R I
Sbjct: 516 IVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDI 575
Query: 279 ITTK 268
T+K
Sbjct: 576 HTSK 579
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R I
Sbjct: 514 IVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDI 573
Query: 279 ITTK 268
T+K
Sbjct: 574 HTSK 577
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R I
Sbjct: 516 IVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDI 575
Query: 279 ITTK 268
T+K
Sbjct: 576 HTSK 579
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/64 (54%), Positives = 40/64 (62%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
I+ LL MDG D V VI ATNR DTLDPAL RPGR DR++ F LPD +R I
Sbjct: 516 IVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDI 575
Query: 279 ITTK 268
T+K
Sbjct: 576 HTSK 579
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFS 283
R+L +LL ++DG ++++ V ++ ATNR D LD ALLRPGRLDR I LP +R I
Sbjct: 579 RVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTRRAILE 638
Query: 282 TITTKM 265
T KM
Sbjct: 639 MRTKKM 644
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 244 LEEFVARPDRVSGADINAICQEAGMHAVREN 152
+++ V + SGA++ A+C+ A M A+RE+
Sbjct: 653 IDKLVEKTSGYSGAELVAVCRTAAMFAMRES 683
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 61.7 bits (143), Expect = 4e-10
Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = -3
Query: 471 EVQRILLELLNQMDGFD-QTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 295
E + L +LL +MDGF ++V VI ATNR D LD ALLRPGR DR+I P+PD + +
Sbjct: 412 EQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRA 471
Query: 294 LIF 286
IF
Sbjct: 472 SIF 474
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFEK 119
SGADI+ +C EA + A R+ + + K FE+
Sbjct: 502 SGADISNVCNEAALIAARDANHEISNKHFEQ 532
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAI 509
F +++SP I+FIDEIDA+
Sbjct: 378 FSMARKNSPCILFIDEIDAV 397
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 60.5 bits (140), Expect = 9e-10
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
++ +LL++MDG +Q N+ VI TNR D +D ALLRPGRL+ ++E LPD + I
Sbjct: 427 VVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKI 486
Query: 279 ITTKM 265
T +M
Sbjct: 487 HTARM 491
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 60.5 bits (140), Expect = 9e-10
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
++ +LL++MDG +Q N+ VI TNR D +D ALLRPGRL+ ++E LPD + I
Sbjct: 427 VVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKI 486
Query: 279 ITTKM 265
T +M
Sbjct: 487 HTARM 491
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 60.5 bits (140), Expect = 9e-10
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = -3
Query: 459 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFST 280
++ +LL++MDG +Q N+ VI TNR D +D ALLRPGRL+ ++E LPD + I
Sbjct: 361 VVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKI 420
Query: 279 ITTKM 265
T +M
Sbjct: 421 HTARM 425
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/71 (43%), Positives = 42/71 (59%)
Frame = -3
Query: 471 EVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 292
E ++ L +LL +MDG V V+ +TNRAD LD ALLRPGR DR I LP +++
Sbjct: 409 EEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKD 468
Query: 291 IFSTITTKMNL 259
+F K+ L
Sbjct: 469 MFELYMRKIKL 479
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFE 122
+GADI +C E+ + A ++V KD E
Sbjct: 498 TGADIMNVCNESAIRAASNKCHVVTHKDME 527
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/71 (43%), Positives = 42/71 (59%)
Frame = -3
Query: 471 EVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 292
E ++ L +LL +MDG V V+ +TNRAD LD ALLRPGR DR I LP +++
Sbjct: 409 EEEQTLNQLLVEMDGMGSGNGVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERKD 468
Query: 291 IFSTITTKMNL 259
+F K+ L
Sbjct: 469 MFELYMRKIKL 479
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFE 122
+GADI +C E+ + A ++V KD E
Sbjct: 498 TGADIMNVCNESAIRAASNKCHVVTHKDME 527
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = -3
Query: 450 ELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITT 271
+LL++MDGF + + VI ATNR D LD ALLRPGR D ++ P PD + IF+ +
Sbjct: 324 QLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLS 383
Query: 270 KM 265
K+
Sbjct: 384 KI 385
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAILLKDLTPKLVP 476
F + +P IIFIDEID++ K ++ + P
Sbjct: 286 FDKAKARAPCIIFIDEIDSVGSKRVSNSIHP 316
>AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical
protein Y108F1.1 protein.
Length = 238
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -3
Query: 471 EVQRILLELLNQMDGFDQTTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 295
E ++ L +LL +MD V++A TNRAD LD ALLRPGR DR I LP +++
Sbjct: 54 EEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 113
Query: 294 LIFSTITTKMNL 259
+F K+ L
Sbjct: 114 DMFELYMRKIKL 125
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFE 122
+GADI +C E+ + A ++V KD E
Sbjct: 144 TGADIMNVCNESAIRAASNKCHVVTIKDME 173
>AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical
protein Y47C4A.1 protein.
Length = 238
Score = 54.0 bits (124), Expect = 8e-08
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = -3
Query: 471 EVQRILLELLNQMDGFDQTTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 295
E ++ L +LL +MD V++A TNRAD LD ALLRPGR DR I LP +++
Sbjct: 54 EEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDLPTVLERK 113
Query: 294 LIFSTITTKMNL 259
+F K+ L
Sbjct: 114 DMFELYMRKIKL 125
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 211 SGADINAICQEAGMHAVRENRYIVLPKDFE 122
+GADI +C E+ + A ++V KD E
Sbjct: 144 TGADIMNVCNESAIRAASNKCHVVTIKDME 173
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR--KIEFPLPDRRQKRLI 289
R++ +LL +MDG + V +I ATNR D +D A+LRPGRLD+ ++FP + R L
Sbjct: 653 RLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILR 712
Query: 288 FST 280
ST
Sbjct: 713 KST 715
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR--KIEFPLPDRRQKRLI 289
R++ +LL +MDG + V +I ATNR D +D A+LRPGRLD+ ++FP + R L
Sbjct: 653 RLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDILR 712
Query: 288 FST 280
ST
Sbjct: 713 KST 715
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = -3
Query: 468 VQRILLELLNQMDGFDQT--TNVKVIMATNRADTLDPALLRPGRLDRKIEF-PLPDRRQK 298
+ RI+ +LL ++D + T V V+ ATNR D LD +L+ PGR D+ +E P D K
Sbjct: 578 IDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESK 637
Query: 297 RLIFSTITTKM 265
I ++ KM
Sbjct: 638 TKILEAVSRKM 648
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 253 EVDLEEFVARPD-RVSGADINAICQEAGMHAVRE 155
+VDL E ++ D ++SGA + +I AGM A+ E
Sbjct: 653 DVDLREIASKVDEKMSGAQLFSIISNAGMAAIVE 686
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = -3
Query: 468 VQRILLELLNQMDGFDQT--TNVKVIMATNRADTLDPALLRPGRLDRKIEF-PLPDRRQK 298
+ RI+ +LL ++D + T V V+ ATNR D LD +L+ PGR D+ +E P D K
Sbjct: 578 IDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESK 637
Query: 297 RLIFSTITTKM 265
I ++ KM
Sbjct: 638 TKILEAVSRKM 648
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 253 EVDLEEFVARPD-RVSGADINAICQEAGMHAVRE 155
+VDL E ++ D ++SGA + +I AGM A+ E
Sbjct: 653 DVDLREIASKVDEKMSGAQLFSIISNAGMAAIVE 686
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = -3
Query: 468 VQRILLELLNQMDGFDQT--TNVKVIMATNRADTLDPALLRPGRLDRKIEF-PLPDRRQK 298
+ RI+ +LL ++D + T V V+ ATNR D LD +L+ PGR D+ +E P D K
Sbjct: 578 IDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESK 637
Query: 297 RLIFSTITTKM 265
I ++ KM
Sbjct: 638 TKILEAVSRKM 648
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 253 EVDLEEFVARPD-RVSGADINAICQEAGMHAVRE 155
+VDL E ++ D ++SGA + +I AGM A+ E
Sbjct: 653 DVDLREIASKVDEKMSGAQLFSIISNAGMAAIVE 686
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 286
R++ +LL ++DG + +I+ T+R D +D ALLRPGR D + P++ ++ I
Sbjct: 121 RVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIM 180
Query: 285 STITTKM 265
+T K+
Sbjct: 181 KVLTNKL 187
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 286
R++ +LL ++DG + +I+ T+R D +D ALLRPGR D + P++ ++ I
Sbjct: 847 RVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIM 906
Query: 285 STITTKM 265
+T K+
Sbjct: 907 KVLTNKL 913
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 462 RILLELLNQMDGFDQTTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 286
R++ +LL ++DG + +I+ T+R D +D ALLRPGR D + P++ ++ I
Sbjct: 847 RVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCGHPEKTERLDIM 906
Query: 285 STITTKM 265
+T K+
Sbjct: 907 KVLTNKL 913
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -3
Query: 447 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 322
LLN +DG M TN + LDPAL+RPGR+DRK F
Sbjct: 286 LLNALDGVACAEERLTFMTTNYVERLDPALIRPGRVDRKQYF 327
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = -3
Query: 447 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 322
LLN +DG M TN + LDPAL+RPGR+DRK F
Sbjct: 332 LLNALDGVACAEERLTFMTTNYVERLDPALIRPGRVDRKQYF 373
>Z69794-5|CAA93682.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 30.7 bits (66), Expect = 0.81
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 363 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSVKWIWKSSWLDRTACP 208
ALL + ++ P+ ++L + K NL KW W++R ACP
Sbjct: 72 ALLARSGSELCMKIPIKSCLDQKLDVTEALRKFNLGDKWNSSIEWINRVACP 123
>Z69789-6|CAA93652.1| 506|Caenorhabditis elegans Hypothetical
protein F17H10.1 protein.
Length = 506
Score = 30.7 bits (66), Expect = 0.81
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 363 ALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSVKWIWKSSWLDRTACP 208
ALL + ++ P+ ++L + K NL KW W++R ACP
Sbjct: 72 ALLARSGSELCMKIPIKSCLDQKLDVTEALRKFNLGDKWNSSIEWINRVACP 123
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -2
Query: 280 NHYQDEPFGEVDLEEFVARPDRVSGADINAICQEAGMHAVRENRYIVLPKDFEKGYKNNI 101
NHY D E LEEF+A+ + ++G + A ++ + +N IV+P + Y+ N+
Sbjct: 54 NHYIDSVTDETSLEEFLAKAE-LAGTEFTA--EKEQFKIIEKNSAIVVPTRLD--YRANL 108
Query: 100 K-KDESEY 80
+ E+E+
Sbjct: 109 DLQKENEH 116
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = -2
Query: 253 EVDLEEFVARPDRVSGADINAICQEAGMHAVR 158
E++ ++ AR + SGAD+ ++C+ A ++ +R
Sbjct: 383 EINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = -2
Query: 253 EVDLEEFVARPDRVSGADINAICQEAGMHAVR 158
E++ ++ AR + SGAD+ ++C+ A ++ +R
Sbjct: 383 EINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = -2
Query: 253 EVDLEEFVARPDRVSGADINAICQEAGMHAVR 158
E++ ++ AR + SGAD+ ++C+ A ++ +R
Sbjct: 383 EINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
>Z73898-9|CAA98066.2| 913|Caenorhabditis elegans Hypothetical
protein ZK822.1 protein.
Length = 913
Score = 28.7 bits (61), Expect = 3.3
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = -3
Query: 414 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITTKMNLSVKWIWKS 235
T+ V NRA P ++RP + D +I+ + D R S TT+ SV
Sbjct: 141 TSSDVSYGRNRA----PPIVRPEQSDSEIDEQIFDDDDHR---SRDTTRRCDSVNVPRHQ 193
Query: 234 SWLDRTACPAPTSTPSVRRPACTL-SGKTDTLYFLKISKRVTRI 106
+ +AC +P+S S R P+ T+ + ++ L L + +R T I
Sbjct: 194 NDNSTSACTSPSSASSSRDPSETMTTSRSSFLDLLGLRRRSTHI 237
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 210 PAPTSTPSVRRPACTLSGKTDTLYFLKISKRVTRITSRKMRANMNFIN 67
P P S P P + +++TLY + IS +V R + R +FIN
Sbjct: 401 PIPKSDP----PQMIVCNRSNTLYVVNISGQVVRTMTSGKREKGDFIN 444
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAIL 506
F Q+ P IIFIDEID+ L
Sbjct: 166 FSVAQKFQPTIIFIDEIDSFL 186
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAIL 506
F Q+ P IIFIDEID+ L
Sbjct: 169 FSVAQKFQPTIIFIDEIDSFL 189
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 568 FPSCQRDSPAIIFIDEIDAIL 506
F + P+IIFIDEID+IL
Sbjct: 263 FQIARNAQPSIIFIDEIDSIL 283
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 210 PAPTSTPSVRRPACTLSGKTDTLYFLKISKRVTRITSRKMRANMNFIN 67
P P S P P + +++TLY + IS +V R + R +FIN
Sbjct: 401 PIPKSDP----PQMIVCNRSNTLYVVNISGQVVRTMTSGKREKGDFIN 444
>AC006748-3|AAF60513.2| 382|Caenorhabditis elegans Hypothetical
protein Y39A3B.2 protein.
Length = 382
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 294 LIFSTITTKMNLSVKWIWKSSWLDRTACPAPTS 196
L+ S I T + +++ W+ S W+DR A PA S
Sbjct: 205 LVQSYIPTGLIVAISWV--SFWIDRRAVPARVS 235
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -3
Query: 225 DRTA-CPAPTSTPSVRRPACTLSGKT 151
DRTA C P V RP C +G+T
Sbjct: 386 DRTAECECPNRCEDVMRPVCATNGET 411
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = -3
Query: 225 DRTA-CPAPTSTPSVRRPACTLSGKT 151
DRTA C P V RP C +G+T
Sbjct: 394 DRTAECECPNRCEDVMRPVCATNGET 419
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 247 DLEEFVARPDRVSGADINAICQEAGMHAVRE 155
+LE D SGAD+ +C EA M +R+
Sbjct: 507 NLERIRELTDGYSGADMRQLCTEAAMGPIRD 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,232,901
Number of Sequences: 27780
Number of extensions: 268618
Number of successful extensions: 860
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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