Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0677.Seq
(449 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X55777-1|CAA39296.1| 467|Homo sapiens protein ( H.sapiens Mahla... 29 7.3
BC038105-1|AAH38105.1| 576|Homo sapiens MPP7 protein protein. 29 9.7
BC025727-1|AAH25727.1| 273|Homo sapiens TRAV20 protein protein. 29 9.7
AL391423-2|CAI17344.1| 312|Homo sapiens novel protein protein. 29 9.7
AL391423-1|CAI17345.1| 576|Homo sapiens novel protein protein. 29 9.7
AL390866-3|CAI12709.1| 312|Homo sapiens novel protein protein. 29 9.7
AL390866-2|CAI12708.1| 576|Homo sapiens novel protein protein. 29 9.7
AL355501-2|CAI13640.1| 312|Homo sapiens novel protein protein. 29 9.7
AL355501-1|CAI13641.1| 576|Homo sapiens novel protein protein. 29 9.7
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 29 9.7
>X55777-1|CAA39296.1| 467|Homo sapiens protein ( H.sapiens Mahlavu
hepatocellular carcinoma hhc(M) DNA. ).
Length = 467
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 216 DFTGGRTSCESARVGTTAPCLFLP*SSNAFRFEG-RGSRCNY 94
D + SC+S G A LFL SS+ EG RG +C +
Sbjct: 169 DLASNQISCDSREGGVKATGLFLSTSSHVMTPEGRRGRKCEH 210
>BC038105-1|AAH38105.1| 576|Homo sapiens MPP7 protein protein.
Length = 576
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 202
Y I + P ++RL R + +NA ++ R+ QGA P T D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525
>BC025727-1|AAH25727.1| 273|Homo sapiens TRAV20 protein protein.
Length = 273
Score = 28.7 bits (61), Expect = 9.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 407 LSEASQXXVQEKLRATDRQXTAFTHELATKPNPLSDTPALTTRGHDTTSRLYYYKGKR 234
L A + +E+L+AT + +F H A KP S T RG + L + KG +
Sbjct: 71 LYSAGEEKEKERLKATLTKKESFLHITAPKPED-SATYLCAVRGRGSQGNLIFGKGTK 127
>AL391423-2|CAI17344.1| 312|Homo sapiens novel protein protein.
Length = 312
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 202
Y I + P ++RL R + +NA ++ R+ QGA P T D QE++
Sbjct: 243 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 286
>AL391423-1|CAI17345.1| 576|Homo sapiens novel protein protein.
Length = 576
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 202
Y I + P ++RL R + +NA ++ R+ QGA P T D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525
>AL390866-3|CAI12709.1| 312|Homo sapiens novel protein protein.
Length = 312
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 202
Y I + P ++RL R + +NA ++ R+ QGA P T D QE++
Sbjct: 243 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 286
>AL390866-2|CAI12708.1| 576|Homo sapiens novel protein protein.
Length = 576
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 202
Y I + P ++RL R + +NA ++ R+ QGA P T D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525
>AL355501-2|CAI13640.1| 312|Homo sapiens novel protein protein.
Length = 312
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 202
Y I + P ++RL R + +NA ++ R+ QGA P T D QE++
Sbjct: 243 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 286
>AL355501-1|CAI13641.1| 576|Homo sapiens novel protein protein.
Length = 576
Score = 28.7 bits (61), Expect = 9.7
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YNINVPPI*LQRLPRPSNRNALLLHGRNRQGAVVP-TRADSQEVL 202
Y I + P ++RL R + +NA ++ R+ QGA P T D QE++
Sbjct: 482 YVIFIKPPSIERL-RETRKNAKIISSRDDQGAAKPFTEEDFQEMI 525
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 28.7 bits (61), Expect = 9.7
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 56 EAIDIYNINVPPI*LQRLPRPSNRNAL-LLHGRNRQGAVVPTRADSQEVLPP 208
+ +D+Y PP L+ +P+P R L G +R+ +R D + LPP
Sbjct: 2104 QRVDLYQQASPPDALRWIPKPWERTGLPPREGPSRRAEEPGSRGDKEPGLPP 2155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,681,495
Number of Sequences: 237096
Number of extensions: 1411210
Number of successful extensions: 2812
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2812
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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