Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0674.Seq
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-8|CAB60959.1|  297|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>AL132898-8|CAB60959.1|  297|Caenorhabditis elegans Hypothetical
           protein Y59A8B.11 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = -2

Query: 418 DIEYLGVRSVRAWRILLLKPLIAQSSTIPILLSFVFSTVRVFGSNF 281
           D  YL V      R +LLK  + +S  I     F    VRVF  NF
Sbjct: 221 DTAYLSVADAVKIRDILLKSTVFESGIITSRNIFSVGVVRVFNPNF 266


>Z72510-3|CAA96653.1|  366|Caenorhabditis elegans Hypothetical
           protein F53B7.4 protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 138 RECKALLYNNIRCSSSNVLYDCDCYC 61
           +EC +  Y +IRC   ++ Y+C  YC
Sbjct: 128 KECSS--YESIRCPEYSLCYNCSKYC 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,669,455
Number of Sequences: 27780
Number of extensions: 243152
Number of successful extensions: 615
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)