Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0672.Seq
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L40395-1|AAC42002.1|  346|Homo sapiens protein ( Homo sapiens (c...    29   7.9  
BC011750-1|AAH11750.1|  351|Homo sapiens eukaryotic translation ...    29   7.9  
BC003165-1|AAH03165.1|  351|Homo sapiens eukaryotic translation ...    29   7.9  
BC000494-1|AAH00494.1|  351|Homo sapiens eukaryotic translation ...    29   7.9  
AF035280-1|AAB88176.1|  351|Homo sapiens protein ( Homo sapiens ...    29   7.9  
AC006530-5|AAD30183.1|  351|Homo sapiens EIF-2B protein.               29   7.9  

>L40395-1|AAC42002.1|  346|Homo sapiens protein ( Homo sapiens
           (clone S20iii15) mRNA, 3' end of cds. ).
          Length = 346

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 275 IDTAAIDHTHTSEIIMSTNYQMTIEQLFKHS 183
           I   A++H H++E+IM+  +  T+E   K +
Sbjct: 145 IAAQALEHIHSNEVIMTIGFSRTVEAFLKEA 175


>BC011750-1|AAH11750.1|  351|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 2 beta, 39kDa protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 275 IDTAAIDHTHTSEIIMSTNYQMTIEQLFKHS 183
           I   A++H H++E+IM+  +  T+E   K +
Sbjct: 151 IAAQALEHIHSNEVIMTIGFSRTVEAFLKEA 181


>BC003165-1|AAH03165.1|  351|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 2 beta, 39kDa protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 275 IDTAAIDHTHTSEIIMSTNYQMTIEQLFKHS 183
           I   A++H H++E+IM+  +  T+E   K +
Sbjct: 151 IAAQALEHIHSNEVIMTIGFSRTVEAFLKEA 181


>BC000494-1|AAH00494.1|  351|Homo sapiens eukaryotic translation
           initiation factor 2B, subunit 2 beta, 39kDa protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 275 IDTAAIDHTHTSEIIMSTNYQMTIEQLFKHS 183
           I   A++H H++E+IM+  +  T+E   K +
Sbjct: 151 IAAQALEHIHSNEVIMTIGFSRTVEAFLKEA 181


>AF035280-1|AAB88176.1|  351|Homo sapiens protein ( Homo sapiens
           clone 23689 mRNA, complete cds. ).
          Length = 351

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 275 IDTAAIDHTHTSEIIMSTNYQMTIEQLFKHS 183
           I   A++H H++E+IM+  +  T+E   K +
Sbjct: 151 IAAQALEHIHSNEVIMTIGFSRTVEAFLKEA 181


>AC006530-5|AAD30183.1|  351|Homo sapiens EIF-2B protein.
          Length = 351

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 275 IDTAAIDHTHTSEIIMSTNYQMTIEQLFKHS 183
           I   A++H H++E+IM+  +  T+E   K +
Sbjct: 151 IAAQALEHIHSNEVIMTIGFSRTVEAFLKEA 181


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,032,694
Number of Sequences: 237096
Number of extensions: 1130453
Number of successful extensions: 5107
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5107
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)