Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0671.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   2.2  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   2.8  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   2.8  
AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450 pr...    23   3.8  
AY341151-1|AAR13715.1|   98|Anopheles gambiae BolA protein.            23   3.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   5.0  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    22   8.7  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    22   8.7  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    22   8.7  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 231 RNVSKWYSSVDRYRGHFF 178
           R V  W S +DR R HF+
Sbjct: 285 RPVYWWTSEIDRLRSHFY 302


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 216 WYSSVDRYRGHFFCK 172
           WY +VD   G+ FCK
Sbjct: 243 WYYTVDWVAGNLFCK 257


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 216 WYSSVDRYRGHFFCK 172
           WY +VD   G+ FCK
Sbjct: 244 WYYTVDWVAGNLFCK 258


>AY745218-1|AAU93485.1|  159|Anopheles gambiae cytochrome P450
           protein.
          Length = 159

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 234 HRNVSKWYSSVDRYRGHFF 178
           HRN + W S  DR+R   F
Sbjct: 101 HRNPAYWGSDADRFRPERF 119


>AY341151-1|AAR13715.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
 Frame = +2

Query: 215 HFETLRWSFQRHFQEVFQSDYK-----TKFDEAKIWYEHRLIDDMVXQAIKGSMWXCLXL 379
           H E +  S+  +  +  ++ +K     T+F+   +   HRL++++V   + G     L +
Sbjct: 13  HLEVVNESYMHNVPKGSETHFKVLVVSTQFEGLPLIKRHRLVNEIVKSQLAGDFVHALSI 72

Query: 380 AXTT 391
              T
Sbjct: 73  VAKT 76


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 35  ELVYTTRDGTTERRV 79
           ELVY T DG   RRV
Sbjct: 614 ELVYDTADGPVTRRV 628


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 142 VLCPFQFSGSFTEKMASIPVYXR 210
           V+ PF   G F    AS+P Y +
Sbjct: 589 VVIPFLIFGGFFLNSASVPAYFK 611


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 142 VLCPFQFSGSFTEKMASIPVYXR 210
           V+ PF   G F    AS+P Y +
Sbjct: 589 VVIPFLIFGGFFLNSASVPAYFK 611


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 142 VLCPFQFSGSFTEKMASIPVYXR 210
           V+ PF   G F    AS+P Y +
Sbjct: 567 VVIPFLIFGGFFLNSASVPAYFK 589


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,394
Number of Sequences: 2352
Number of extensions: 9606
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)