Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0670.Seq
(429 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 3.8
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 5.0
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 5.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.6
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 21 6.6
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 6.6
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 20 8.7
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.4 bits (43), Expect = 3.8
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 119 SWNCLHESCYRR-ISWILRCLNSNQCYWNC 33
+W C+++ C RR I + ++ + C C
Sbjct: 57 TWQCINQRCERRHIKGAIPVVSLSTCSMLC 86
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.0 bits (42), Expect = 5.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 206 CRRMFWILXCLSLNQCYWNCRWS 138
C R++ I S +WNC W+
Sbjct: 95 CERLYGIFADESKCDVFWNC-WN 116
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.0 bits (42), Expect = 5.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 206 CRRMFWILXCLSLNQCYWNCRWS 138
C R++ I S +WNC W+
Sbjct: 95 CERLYGIFADESKCDVFWNC-WN 116
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 225 VPTVVMEVYHHRQYQXH 275
V TVV+ YHHR H
Sbjct: 290 VLTVVVLNYHHRTADIH 306
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 225 VPTVVMEVYHHRQYQXH 275
V TVV+ YHHR H
Sbjct: 290 VLTVVVLNYHHRTADIH 306
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 225 VPTVVMEVYHHRQYQXH 275
V TVV+ YHHR H
Sbjct: 290 VLTVVVLNYHHRTADIH 306
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 225 VPTVVMEVYHHRQYQXH 275
V TVV+ YHHR H
Sbjct: 290 VLTVVVLNYHHRTADIH 306
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.6 bits (41), Expect = 6.6
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 225 VPTVVMEVYHHRQYQXH 275
V TVV+ YHHR H
Sbjct: 290 VLTVVVLNYHHRTADIH 306
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 20.6 bits (41), Expect = 6.6
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -2
Query: 209 CCRRMFWILXCLSLNQCY 156
CCR F ++L CY
Sbjct: 83 CCRESFLRERTITLTHCY 100
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 20.6 bits (41), Expect = 6.6
Identities = 5/21 (23%), Positives = 12/21 (57%)
Frame = -2
Query: 275 VXLVLPVMIHFHHDCWNCIHK 213
+ L M+H ++ W C+++
Sbjct: 146 ISFFLNFMLHCNNTTWRCLYR 166
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 20.2 bits (40), Expect = 8.7
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +3
Query: 138 RPPTVPVTLI 167
+PPT+PVT I
Sbjct: 127 KPPTLPVTSI 136
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,063
Number of Sequences: 336
Number of extensions: 1386
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9460170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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