Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0670.Seq
         (429 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK098423-1|BAC05305.1|  485|Homo sapiens protein ( Homo sapiens ...    30   2.9  
BC030023-1|AAH30023.1|  440|Homo sapiens glycosyltransferase 8 d...    29   8.8  

>AK098423-1|BAC05305.1|  485|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25557 fis, clone JTH02756. ).
          Length = 485

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +3

Query: 87  AVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHPAAAALMDTVPTVV 239
           +V  +++T+P ++M+    P V VT+IQT         A A     VP+ V
Sbjct: 384 SVMLILRTMPTLMMRTEDRPKVAVTMIQTAAAMGVASGAGATAAAPVPSPV 434


>BC030023-1|AAH30023.1|  440|Homo sapiens glycosyltransferase 8
           domain containing 3 protein.
          Length = 440

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 179 CLSLNQCYWNCRWSIHFHHDSWNCLHESCYR 87
           C   + CYWN  W +       NC  E+ +R
Sbjct: 75  CKDFSLCYWNPYWMLPSDVCGMNCFWEAAFR 105


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,224,531
Number of Sequences: 237096
Number of extensions: 788822
Number of successful extensions: 2285
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2285
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)