Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0670.Seq
(429 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009932-1|AAQ22401.1| 952|Drosophila melanogaster SD08871p pro... 30 1.1
AE014298-935|AAF46190.2| 1034|Drosophila melanogaster CG14442-PA... 30 1.1
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr... 30 1.5
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p... 30 1.5
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB... 30 1.5
EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein. 28 6.1
BT028869-1|ABI34250.2| 260|Drosophila melanogaster RT01160p pro... 28 6.1
BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p pro... 28 6.1
AE014298-2961|AAF45367.1| 260|Drosophila melanogaster CG9571-PA... 28 6.1
AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-P... 28 6.1
>BT009932-1|AAQ22401.1| 952|Drosophila melanogaster SD08871p
protein.
Length = 952
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 252 HHRQYQXH*FKLKQCRIQYIRWLQHLWIQFQQXXMEVYHPL 374
H +Q Q H + +Q + Q++ Q +QFQQ +++Y PL
Sbjct: 67 HQQQQQQHQQQQQQFQQQHLHQQQQDQLQFQQQHLQLYAPL 107
>AE014298-935|AAF46190.2| 1034|Drosophila melanogaster CG14442-PA
protein.
Length = 1034
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 252 HHRQYQXH*FKLKQCRIQYIRWLQHLWIQFQQXXMEVYHPL 374
H +Q Q H + +Q + Q++ Q +QFQQ +++Y PL
Sbjct: 67 HQQQQQQHQQQQQQFQQQHLHQQQQDQLQFQQQHLQLYAPL 107
>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
protein.
Length = 2176
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 30 PAVPVTLIRIQTA*DPGNPAVAA----LMKTVPRVVMKMYR--PPTVPVTLIQTQTXQDP 191
PA P + T P P++A L T+P V + PPT+P T TQ+ Q
Sbjct: 904 PATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQTL 963
Query: 192 EHPAAAALMDTVP 230
P +A + T P
Sbjct: 964 PPPTSAINVYTTP 976
>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
protein.
Length = 2165
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 30 PAVPVTLIRIQTA*DPGNPAVAA----LMKTVPRVVMKMYR--PPTVPVTLIQTQTXQDP 191
PA P + T P P++A L T+P V + PPT+P T TQ+ Q
Sbjct: 893 PATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQTL 952
Query: 192 EHPAAAALMDTVP 230
P +A + T P
Sbjct: 953 PPPTSAINVYTTP 965
>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
protein.
Length = 1984
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +3
Query: 30 PAVPVTLIRIQTA*DPGNPAVAA----LMKTVPRVVMKMYR--PPTVPVTLIQTQTXQDP 191
PA P + T P P++A L T+P V + PPT+P T TQ+ Q
Sbjct: 697 PATPAPVPPATTTPPPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTPPSTQSAQTL 756
Query: 192 EHPAAAALMDTVP 230
P +A + T P
Sbjct: 757 PPPTSAINVYTTP 769
>EF057961-1|ABL84896.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057960-1|ABL84895.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057959-1|ABL84894.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057958-1|ABL84893.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057957-1|ABL84892.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057956-1|ABL84891.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057955-1|ABL84890.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057954-1|ABL84889.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057953-1|ABL84888.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057952-1|ABL84887.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057951-1|ABL84886.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057950-1|ABL84885.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057949-1|ABL84884.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057948-1|ABL84883.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>EF057947-1|ABL84882.1| 413|Drosophila melanogaster Nup98 protein.
Length = 413
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 164 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 207
>BT028869-1|ABI34250.2| 260|Drosophila melanogaster RT01160p
protein.
Length = 260
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 192 EHPAAAALMDTVPTVVMEVYHHRQYQXH 275
+HP + + + P + E YHH +Y H
Sbjct: 231 QHPHSHFIQQSKPLHIQEPYHHTRYHLH 258
>BT011076-1|AAR82742.1| 1191|Drosophila melanogaster SD08263p
protein.
Length = 1191
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 10 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 53
>AE014298-2961|AAF45367.1| 260|Drosophila melanogaster CG9571-PA
protein.
Length = 260
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 192 EHPAAAALMDTVPTVVMEVYHHRQYQXH 275
+HP + + + P + E YHH +Y H
Sbjct: 231 QHPHSHFIQQSKPLHIQEPYHHTRYHLH 258
>AE014297-3391|AAF56190.3| 1960|Drosophila melanogaster CG10198-PA
protein.
Length = 1960
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 57 IQTA*DPGNPAVAALMKTVPRVVMKMYRPPTVPVTLIQTQTXQDPEHP 200
IQT D G+P + L + VPR + YRP + ++ PE+P
Sbjct: 779 IQTGMDQGSPHNSTLNELVPRKPLDTYRPSST----VRLSVSTIPENP 822
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,916,080
Number of Sequences: 53049
Number of extensions: 260733
Number of successful extensions: 889
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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