Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0667.Seq
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   0.96 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.7  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   1.7  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.7  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   1.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   1.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   2.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   2.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   9.0  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 297 VTLLVAVSHSKRETRRR 347
           V LLV +S S+R TRRR
Sbjct: 19  VVLLVHISSSERVTRRR 35


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 201 LCLNAXKAEASLAESGKDCSLWS 269
           LC +  K  +S   +G  C LWS
Sbjct: 35  LCQSFRKQNSSSCGNGNRCDLWS 57


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 151 FMHSAERPVVRSYHPRDY 204
           F    E P  R+Y+P DY
Sbjct: 310 FFRELEAPCPRNYNPADY 327


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 151 FMHSAERPVVRSYHPRDY 204
           F    E P  R+Y+P DY
Sbjct: 310 FFRELEAPCPRNYNPADY 327


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASLAESGKDC 257
           A G AA G+ +PS     ++  A A  A + K C
Sbjct: 18  AFGAAASGSMVPSFSSTASSALAAAVDAATDKSC 51


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASLAESGKDC 257
           A G AA G+ +PS     ++  A A  A + K C
Sbjct: 77  AFGAAASGSMVPSFSSTASSALAAAVDAATDKSC 110


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASLAESGKDC 257
           A G AA G+ +PS     ++  A A  A + K C
Sbjct: 18  AFGAAASGSMVPSFSSTASSALAAAVDAATDKSC 51


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 156 ALGRAAGGAKLPSAGLCLNAXKAEASLAESGKDC 257
           A G AA G+ +PS     ++  A A  A + K C
Sbjct: 77  AFGAAASGSMVPSFSSTASSALAAAVDAATDKSC 110


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 160 SAERPVVRSYHPRDY 204
           SA  P+VRSY P  Y
Sbjct: 281 SAATPLVRSYAPERY 295


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -2

Query: 288  EPPDSRGSTVSNPCRIRLGWLRP 220
            +PPD    T      IR+ W+ P
Sbjct: 1102 QPPDKATCTTLTAQTIRVSWVSP 1124


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 165 RAAGGAKLPSAGLC 206
           ++  G ++PSAGLC
Sbjct: 99  KSCQGCEMPSAGLC 112


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 165 RAAGGAKLPSAGLC 206
           ++  G ++PSAGLC
Sbjct: 47  KSCQGCEMPSAGLC 60


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 165 RAAGGAKLPSAGLC 206
           ++  G ++PSAGLC
Sbjct: 230 KSCQGCEMPSAGLC 243


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 11/43 (25%), Positives = 16/43 (37%)
 Frame = +2

Query: 245 RQGLLTVEPRESGGSKQCDFTSRRFAFKTRDATSKPIWIRGDR 373
           R+G  T  P      + CD        K  D +  P  + GD+
Sbjct: 443 REGFYTQNPGFLAYFEICDMLLNEGWHKGMDESGSPYMVYGDQ 485


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 42   SALNAALLQGLIFKSVTF 95
            S++   L+QG IF  +TF
Sbjct: 1092 SSIRMLLIQGQIFGLITF 1109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,719
Number of Sequences: 336
Number of extensions: 1630
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)