Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0667.Seq
         (439 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC005764-1|AAC62428.1|  420|Homo sapiens R31343_1 protein.             31   2.3  
BC017592-1|AAH17592.2|  429|Homo sapiens zinc and ring finger 4 ...    29   7.0  
Y12476-1|CAA73080.1|  613|Homo sapiens G protein coupled recepto...    29   9.3  
BC040007-1|AAH40007.1|  613|Homo sapiens G protein-coupled recep...    29   9.3  
AF502281-1|AAM18625.2|  613|Homo sapiens Parkin-associated endot...    29   9.3  
AF017262-1|AAB70008.1|  613|Homo sapiens putative G protein-coup...    29   9.3  
AC004925-2|AAD08853.1|  613|Homo sapiens unknown protein.              29   9.3  

>AC005764-1|AAC62428.1|  420|Homo sapiens R31343_1 protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 315 RRLVKSHCLEPPDSRGSTVSNPCRIRLGWLRPXR 214
           RR  K+ CL PP    ST +   R+ +GW RP R
Sbjct: 37  RRCPKASCLPPPVGPSSTQTAK-RVTMGWPRPGR 69


>BC017592-1|AAH17592.2|  429|Homo sapiens zinc and ring finger 4
           protein.
          Length = 429

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 315 RRLVKSHCLEPPDSRGSTVSNPCRIRLGWLRP 220
           RR  K+ CL PP    ST +   R+ +GW RP
Sbjct: 46  RRCPKASCLPPPVGPSSTQTAK-RVTMGWPRP 76


>Y12476-1|CAA73080.1|  613|Homo sapiens G protein coupled receptor
           37 protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +2

Query: 149 GSCTRPSGRWCEATIRGIMPERL*GRSQPSRIRQGLLTVEPRESG 283
           G  TRP G W     RG  P    GR  P+ ++  L   E  E G
Sbjct: 111 GPPTRPPGPWRWKGARGQEPSETLGRGNPTALQLFLQISEEEEKG 155


>BC040007-1|AAH40007.1|  613|Homo sapiens G protein-coupled receptor
           37 (endothelin receptor type B-like) protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +2

Query: 149 GSCTRPSGRWCEATIRGIMPERL*GRSQPSRIRQGLLTVEPRESG 283
           G  TRP G W     RG  P    GR  P+ ++  L   E  E G
Sbjct: 111 GPPTRPPGPWRWKGARGQEPSETLGRGNPTALQLFLQISEEEEKG 155


>AF502281-1|AAM18625.2|  613|Homo sapiens Parkin-associated
           endothelin receptor-like receptor protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +2

Query: 149 GSCTRPSGRWCEATIRGIMPERL*GRSQPSRIRQGLLTVEPRESG 283
           G  TRP G W     RG  P    GR  P+ ++  L   E  E G
Sbjct: 111 GPPTRPPGPWRWKGARGQEPSETLGRGNPTALQLFLQISEEEEKG 155


>AF017262-1|AAB70008.1|  613|Homo sapiens putative G protein-coupled
           receptor protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +2

Query: 149 GSCTRPSGRWCEATIRGIMPERL*GRSQPSRIRQGLLTVEPRESG 283
           G  TRP G W     RG  P    GR  P+ ++  L   E  E G
Sbjct: 111 GPPTRPPGPWRWKGARGQEPSETLGRGNPTALQLFLQISEEEEKG 155


>AC004925-2|AAD08853.1|  613|Homo sapiens unknown protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = +2

Query: 149 GSCTRPSGRWCEATIRGIMPERL*GRSQPSRIRQGLLTVEPRESG 283
           G  TRP G W     RG  P    GR  P+ ++  L   E  E G
Sbjct: 111 GPPTRPPGPWRWKGARGQEPSETLGRGNPTALQLFLQISEEEEKG 155


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,017,734
Number of Sequences: 237096
Number of extensions: 1140101
Number of successful extensions: 2402
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2400
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)