Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0667.Seq
         (439 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003220-1|AAO24975.1|  513|Drosophila melanogaster RE02054p pro...    30   1.2  
AY061284-1|AAL28832.1|  513|Drosophila melanogaster LD20239p pro...    30   1.2  
AE013599-3047|AAF57443.3|  513|Drosophila melanogaster CG11175-P...    30   1.2  
AY118370-1|AAM48399.1|  359|Drosophila melanogaster RE12410p pro...    29   2.8  
AE013599-2604|AAF57760.1|  359|Drosophila melanogaster CG10911-P...    29   2.8  
AE014134-1346|AAF52562.2| 1052|Drosophila melanogaster CG7134-PA...    28   6.4  

>BT003220-1|AAO24975.1|  513|Drosophila melanogaster RE02054p
           protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -2

Query: 318 KRRLVKSHCLEPPDSRGSTVSNP--CRIRLGWLRPXRRSGIIPRMVASHHRPLGRVHEP 148
           K  L  SH   PP   GST ++P  C I    L P       P    SHHRP G   +P
Sbjct: 325 KNNLHDSHRPSPPSLIGSTSNDPIYCSIEPKQLTPP------PAQQRSHHRPRGTHKQP 377


>AY061284-1|AAL28832.1|  513|Drosophila melanogaster LD20239p
           protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -2

Query: 318 KRRLVKSHCLEPPDSRGSTVSNP--CRIRLGWLRPXRRSGIIPRMVASHHRPLGRVHEP 148
           K  L  SH   PP   GST ++P  C I    L P       P    SHHRP G   +P
Sbjct: 325 KNNLHDSHRPSPPSLIGSTSNDPIYCSIEPKQLTPP------PAQQRSHHRPRGTHKQP 377


>AE013599-3047|AAF57443.3|  513|Drosophila melanogaster CG11175-PA
           protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -2

Query: 318 KRRLVKSHCLEPPDSRGSTVSNP--CRIRLGWLRPXRRSGIIPRMVASHHRPLGRVHEP 148
           K  L  SH   PP   GST ++P  C I    L P       P    SHHRP G   +P
Sbjct: 325 KNNLHDSHRPSPPSLIGSTSNDPIYCSIEPKQLTPP------PAQQRSHHRPRGTHKQP 377


>AY118370-1|AAM48399.1|  359|Drosophila melanogaster RE12410p
           protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
 Frame = +3

Query: 42  SALNAALLQGLIFKSVTFMVVSNTAQYERNRSFGHLVHALGRAAGGAKLPSAGLCLNAXK 221
           S L AA+ + +    V   V +N  Q     S+G L   LG    GA +PS      A  
Sbjct: 142 SELLAAVEEEVRLIKVKEEVCTNKTQRAYGESYGQLYADLGDCIAGAPIPSESTSTQASS 201

Query: 222 AEASL------AESGKDCSLWSPESREALNNVT 302
            ++S        ES  D S  S ES    ++V+
Sbjct: 202 TDSSTDSTSASTESSTDSSSVSTESSTDSSSVS 234


>AE013599-2604|AAF57760.1|  359|Drosophila melanogaster CG10911-PA
           protein.
          Length = 359

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
 Frame = +3

Query: 42  SALNAALLQGLIFKSVTFMVVSNTAQYERNRSFGHLVHALGRAAGGAKLPSAGLCLNAXK 221
           S L AA+ + +    V   V +N  Q     S+G L   LG    GA +PS      A  
Sbjct: 142 SELLAAVEEEVRLIKVKEEVCTNKTQRAYGESYGQLYADLGDCIAGAPIPSESTSTQASS 201

Query: 222 AEASL------AESGKDCSLWSPESREALNNVT 302
            ++S        ES  D S  S ES    ++V+
Sbjct: 202 TDSSTDSTSASTESSTDSSSVSTESSTDSSSVS 234


>AE014134-1346|AAF52562.2| 1052|Drosophila melanogaster CG7134-PA
            protein.
          Length = 1052

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 25/90 (27%), Positives = 37/90 (41%)
 Frame = +3

Query: 111  TAQYERNRSFGHLVHALGRAAGGAKLPSAGLCLNAXKAEASLAESGKDCSLWSPESREAL 290
            TA+Y R+ S    +   G   GG+   SA   +    A A+L  +       + +     
Sbjct: 795  TARYYRDVSAIPTIGVFGGGPGGSSSTSASFNIATRSASATLDLNSNPLPK-TTKLTSLN 853

Query: 291  NNVTLLVAVSHSKRETRRRSPFGSAAIDAI 380
            NN T     S +  +T R S  GSA + AI
Sbjct: 854  NNPTTTPPPSSNPADTSRLSGRGSAELQAI 883


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,460,541
Number of Sequences: 53049
Number of extensions: 342754
Number of successful extensions: 937
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)